DRSC/TRiP Functional Genomics Resources

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Protein Alignment vas and Dbp21E2

DIOPT Version :9

Sequence 1:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_608544.1 Gene:Dbp21E2 / 33254 FlyBaseID:FBgn0086130 Length:536 Species:Drosophila melanogaster


Alignment Length:462 Identity:129/462 - (27%)
Similarity:210/462 - (45%) Gaps:55/462 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 RKREFYIPPEPSNDA----IEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQ------HFTSAD 251
            |:.:|.:......||    :.:.|.|.........:..:...|.|.::.|.:|      ..|...
  Fly    50 RRSQFDLTQYEQTDAKFGSLSLASKGWLHNKSKGDFFILNASVRGEELQQEMQTVDEFLESTGMQ 114

  Fly   252 LRDIIIDNVN-KSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLL--EDPHE 313
            :...:::|:. :.|.|:.|.|||..:||:......:..|:||.|||..:||||:.|||  |...|
  Fly   115 IHPQLLENLRVELGIKLLTGIQKQGMPVVHGNEHCLIAAETGCGKTITYLLPIVDKLLQKEVVTE 179

  Fly   314 LELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGR 378
            .:|..|:|:|::|.||||.||.....|....:.||:..:.||.:.:...........:::||.|.
  Fly   180 RKLNTPRVLILTPGRELATQIAGVTEKLTQGTNLKVQSLLGGNTKQLMMNPQFEEVDILVATLGA 244

  Fly   379 LLDFVDRTFITFEDTRFVVLDEADRMLDMGFSED----MRRIMTHVTMRPE--HQTLMFSATFP- 436
            |...|.......|..|.:||||||.:||..|::.    :||...|:..:.:  .|.::.|||.| 
  Fly   245 LSKLVTTGIYRMEQVRHLVLDEADTLLDDTFTDKLSYFLRRFPFHLVQKEDAGTQMILASATMPT 309

  Fly   437 ------------EEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKRSKLIEILSE-- 487
                        :.|:.:....|...:           |.|.|....::|..:.:.|:.::..  
  Fly   310 NTREILHKVIDVDTIREVVSPHLHRLM-----------SHVTQKFLRLSKADRPATLLSLVKHDL 363

  Fly   488 -QADGTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASR 551
             :....|||......:||::.||:.......:::||.|...|......|:||...||..|.|.||
  Fly   364 AKRRPLIVFSNKSTTSDFVSIFLNNSGVNCLNLNGDMLMKIRLGRFEQFQNGHCDVLSTTDVGSR 428

  Fly   552 GLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRA--TSFFDPEKDRAIAADLVKILEGSGQ 614
            |||....:||:|:|.|..:.||:||.||.|||||..:|  |:.....::    .|:|:.:|.:.:
  Fly   429 GLDTTRARHVVNFDFPLHVSDYIHRCGRIGRVGNMDKALVTNLISSRRE----IDVVQRIEHAAR 489

  Fly   615 T---VPD 618
            |   :||
  Fly   490 TGGLLPD 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_001260458.1 DEADc 247..454 CDD:238167 67/228 (29%)
DEXDc 260..467 CDD:214692 67/228 (29%)
Helicase_C 475..584 CDD:278689 37/111 (33%)
Dbp21E2NP_608544.1 P-loop_NTPase 113..314 CDD:304359 64/200 (32%)
DEXDc 126..330 CDD:214692 64/203 (32%)
HELICc 343..462 CDD:238034 39/118 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451596
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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