Protein Alignment vas and Hlc

DIOPT Version :9

• Sequence 1: NP_001260458.1
• Gene: vas / 26067080
• FlyBaseID: FBgn0283442
• Length: 661
• Species: Drosophila melanogaster
• Sequence 2: NP_001285517.1
• Gene: Hlc / 33118
• FlyBaseID: FBgn0001565
• Length: 560
• Species: Drosophila melanogaster
• Alignment Length: 413
• Identity: 103/413 - (24%)
• Similarity: 182/413 - (44%)
• Gaps: 72/413 - (17%)

  Fly   238 SDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLP 302
            |.:.|....|...:|...|:..|.:.|::.||.||..:||::..|:|::..|:|||||||.:.||
  Fly     2 SQMTQKTVQFHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALP 66

  Fly   303 ILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKF---AFESYLKI----GIVYGGTSFRH 360
            ::.|:|.............|:::||:||.    .::||.   ..||..|:    .|.........
  Fly    67 LIQKILNSKLNASEQYVSAVVLAPTKELC----RQSRKVIEQLVESCGKVVRVADIADSSNDTVT 127

  Fly   361 QNECITRGCHVVIATPGRLLDFVDR-TFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRP 424
            |...::....:|:|||..||.:.:. :.:..:....:|:||||.:...|:.:|.:|::.|  :.|
  Fly   128 QRHALSESPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKH--LPP 190

  Fly   425 EHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKRSKLI--EILSE 487
            .:|.::.|||..:::.||.|..|.|.|.:.:               |..:...:.:|.  .||:|
  Fly   191 IYQAVLVSATLTDDVVRMKGLCLNNPVTLKL---------------EEPELVPQDQLSHQRILAE 240

  Fly   488 QAD----------------GTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFK 536
            :.|                .:|:||.:......:..||.:.......::.:...:.|...:..|.
  Fly   241 ENDKPAILYALLKLRLIRGKSIIFVNSIDRCYKVRLFLEQFGIRACVLNSELPANIRIHTISQFN 305

  Fly   537 NGSMKVLIAT-------------------------SVASRGLDIKNIKHVINYDMPSKIDDYVHR 576
            .|:..::||:                         |.||||:|.:.:.:|||:|.|..:..|:||
  Fly   306 KGTYDIIIASDEHHMEKPGGKSATNRKSPRSGDMESSASRGIDFQCVNNVINFDFPRDVTSYIHR 370

  Fly   577 IGRTGRVGNNGRATSFFDPEKDR 599
            .|||.|..|.|...||...::.:
  Fly   371 AGRTARGNNKGSVLSFVSMKESK 393

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vas	NP_001260458.1	DEADc	247..454	CDD:238167	63/214 (29%)
		DEXDc	260..467	CDD:214692	60/214 (28%)
		Helicase_C	475..584	CDD:278689	33/151 (22%)
Hlc	NP_001285517.1	P-loop_NTPase	11..220	CDD:304359	63/214 (29%)
		DEXDc	24..231	CDD:214692	61/227 (27%)
		HELICc	234..386	CDD:238034	34/151 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451607
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840