DRSC/TRiP Functional Genomics Resources

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Protein Alignment vas and mahe

DIOPT Version :9

Sequence 1:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_001284994.1 Gene:mahe / 31707 FlyBaseID:FBgn0029979 Length:945 Species:Drosophila melanogaster


Alignment Length:672 Identity:221/672 - (32%)
Similarity:336/672 - (50%) Gaps:88/672 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GDG-VGGSGGEGGGYQGGNRDVF--GRIGGGRGGGAGGYRGGNRDGGGFHGGRREGERDF----- 93
            |:| ..|:||.|.|.....|..:  |..||..||  .|..|.....|..|.|:..|...:     
  Fly    23 GNGAAAGAGGSGNGAPRHERQYYPRGNFGGAAGG--AGINGAATAAGSMHFGQPYGVMTYGIQNG 85

  Fly    94 ----RGGEGG-----------FRG-GQGGSRGGQGGSRGGQGGFRGGEGGFRGRLYENEDGDERR 142
                ..|.||           |.| |.||..||..|..||.||.||....:..|..:..:|....
  Fly    86 LGMGAAGSGGGNPYRQQNGVAFAGNGLGGGAGGGSGGSGGYGGQRGKNPTYAQRYQKPNNGAGVA 150

  Fly   143 GRLDREERGGERRGRLDREERGGERGERGDGGFARRRRNEDDINNNNNIV----EDVER-KREFY 202
            |............|.|.:|||...:.|:..             |...|:|    |::|. .::||
  Fly   151 GGYQSNNYNAAALGMLSKEERAEIQREKAK-------------NPGRNLVKPKWENLEPFLKDFY 202

  Fly   203 -IPP----EPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNK 262
             |.|    :......||             ...:.:.|:|:::|.|:..|..:.|...:|:.:.:
  Fly   203 NIHPNTLAKSEQQVAEI-------------RRELEITVSGNELPHPVVSFEESSLPAHVIEEMKR 254

  Fly   263 SGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPT 327
            .|:..||.||....|:..|||||:..||||||||.|::||.:..:...|..:....|..::::||
  Fly   255 QGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGEGPIALVLAPT 319

  Fly   328 RELAIQIFNEARKFAF--ESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITF 390
            ||||.||.:..|.:..  :..::...::||:|...|...:.||..|:|||||||:||::......
  Fly   320 RELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPGRLIDFLENRNTNL 384

  Fly   391 EDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAI 455
            :...::|||||||||||||...:|:|:..:  ||:.|.:|:|||:|:|:|.:||:||.:|:.:.|
  Fly   385 QRCTYLVLDEADRMLDMGFEPQIRKIIEQI--RPDRQVVMWSATWPKEVQALAGDFLNDYIQINI 447

  Fly   456 GIVG-GACSDVKQTIYEVNKYAKRSKLIEILSE---------QADGTIVFVETKRGADFLASFLS 510
            |.:. .|..:::|.:....:..|..:|:.:|:|         ..:..|||||||...:.:...:.
  Fly   448 GSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIR 512

  Fly   511 EKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVH 575
            .:.:..||||||:.|::|:..|:||:||...:||||.|||||||::::::|||||.|:..::|||
  Fly   513 AEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVH 577

  Fly   576 RIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQT----VPDFLRTCGAGGDGGYS---- 632
            |||||||....|.|.:||.|:..:. |.:|:.:||.:|||    :.|..|:..:  .|||.    
  Fly   578 RIGRTGRCQQLGTAYTFFTPDNAKQ-ARELISVLEEAGQTPSQALLDLARSMPS--SGGYRGNKR 639

  Fly   633 -NQNFGGVDVRGRGNYVGDATN 653
             |.|.||....|..|.:....|
  Fly   640 WNNNSGGDRNTGGNNGIYQQRN 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_001260458.1 DEADc 247..454 CDD:238167 82/208 (39%)
DEXDc 260..467 CDD:214692 82/209 (39%)
Helicase_C 475..584 CDD:278689 51/117 (44%)
maheNP_001284994.1 PTZ00110 136..656 CDD:240273 184/550 (33%)
DEADc 239..446 CDD:238167 82/208 (39%)
HELICc 457..594 CDD:238034 54/136 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451603
Domainoid 1 1.000 102 1.000 Domainoid score I343
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9750
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

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