DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vas and CG14443

DIOPT Version :9

Sequence 1:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_572330.2 Gene:CG14443 / 31595 FlyBaseID:FBgn0029880 Length:736 Species:Drosophila melanogaster


Alignment Length:727 Identity:164/727 - (22%)
Similarity:278/727 - (38%) Gaps:157/727 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GDWSDDEDTAKSFSGEAEGDGVGGS--GGEGGGYQGGNRDV---------------FGRIGGGRG 66
            |:|.|:|..|:....:....|...|  |.......|.:|.:               ...|..|..
  Fly    11 GNWKDNETDAEKVQKKPFLKGTKSSIWGSSASDISGQSRSLKSSSSVLSSKFVTKRLFTIQHGIE 75

  Fly    67 GGAGGYR------GGNRDGGGFHGGRREGERDFRG-GEGGFRG-----------GQGGSRGGQGG 113
            |....::      .|....|||....||.....|. |.|.|||           ...||......
  Fly    76 GQKPNFKIRSESFSGPHSAGGFSKSTRESRSKSRSMGNGKFRGKSHLRSSSESAHSSGSESSSSD 140

  Fly   114 SRGGQ---------GGFRGGEGGFRGRL-----------------------YENEDGDERRGRLD 146
            |..|.         ....|.:.|.|.|:                       .||::...|...|.
  Fly   141 SNSGSSSDSDSTTGSSSHGSDTGERPRMRSAVFRIHETWQSPNSFKAVKTSRENKESRSRSSSLP 205

  Fly   147 R-----------------EERGGERRGRLDREERGGER------GERG-----------DGGFAR 177
            :                 |.:....|||  ...|.|.|      ..|.           ...|.|
  Fly   206 QKRFCPSKTQNDLTYGSPEPKSPSNRGR--NSWRVGMRTPWKKSQSRSMSCSSIQKILVSRSFTR 268

  Fly   178 RRRNEDDINNNNNIVEDVERKREFYIPPEPSN------DAIEIFSSGIASGIHFSKYNNIPVKVT 236
            .|    ..:.|....:|..:.     |..|||      ...|:::    :..::.|.:||.:...
  Fly   269 SR----SPHRNTLCYQDQSKN-----PSRPSNYNTWKQPMDEVYN----NAANYRKRHNITLTSW 320

  Fly   237 G-SDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFL 300
            . .::|:|:..|..:.....|:..:...||..|||||..:..:...|::::..:..|:|||..:|
  Fly   321 NMRNLPEPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYL 385

  Fly   301 LPILSKLLEDPHELELGR-PQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNEC 364
            ||.:.|:......::..: |.|:|:...||.|:.:..|...:.....|:...:.|.:.::...| 
  Fly   386 LPGIMKMHNQRGLMQHKKGPIVLILVDCREAAVMVQREVLYYTNPLELRTHCLLGNSQWQGHAE- 449

  Fly   365 ITRGCHVVIATPGRLLDFVD--RTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQ 427
                |.:::|:.||||..:|  :..:..|...::|||..|||:|:|...::.|::..  :||..|
  Fly   450 ----CDLLVASAGRLLQMIDNKKHVVELERCTYLVLDNIDRMIDVGLEGNICRLLCR--LRPHAQ 508

  Fly   428 TLMFSATFPEEIQRMAGEFLKNYVFVAIG---IVGGACSDVKQTIYEVNKYAKRSKLIEILSEQA 489
            .::.|.::...::|||.:||..|..:.:|   .:|....:::|.:..||..:|..:|::.|:...
  Fly   509 LIVSSTSWSSNLKRMANKFLGQYTAIRVGEINNIGVRLQNIRQRVEVVNGLSKVERLMKELTAIY 573

  Fly   490 DGT------IVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSV 548
            |.:      :::|:.::..:.|.. |.....|...|||.|...:.:..:.||..|:..:::||.:
  Fly   574 DTSDIPGKVVIYVKRQKVVEELVD-LIRNCVPCEGIHGGRTAQENQGIIHDFGTGAYNIIVATQM 637

  Fly   549 ASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTG--RVGNNGRATSFFDPEKDRAIAADLVKILEG 611
            .|..||:..|::|||||.|..||.||.|:.|||  ....|....|||.....:.:.         
  Fly   638 TSNCLDVPGIRYVINYDFPDNIDKYVQRMSRTGCLSYNRNCEVISFFTMANYKLVT--------- 693

  Fly   612 SGQTVPDFLRTC 623
               .|.|||:.|
  Fly   694 ---EVVDFLKIC 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_001260458.1 DEADc 247..454 CDD:238167 55/209 (26%)
DEXDc 260..467 CDD:214692 55/212 (26%)
Helicase_C 475..584 CDD:278689 35/116 (30%)
CG14443NP_572330.2 P-loop_NTPase 332..535 CDD:304359 55/209 (26%)
DEXDc 345..544 CDD:214692 54/205 (26%)
Helicase_C 560..670 CDD:278689 33/110 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451605
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.