DRSC/TRiP Functional Genomics Resources

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Protein Alignment vas and ZK686.2

DIOPT Version :9

Sequence 1:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_498690.2 Gene:ZK686.2 / 176088 WormBaseID:WBGene00022792 Length:593 Species:Caenorhabditis elegans


Alignment Length:535 Identity:131/535 - (24%)
Similarity:225/535 - (42%) Gaps:117/535 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 GDGGFARRRR----NEDDINNNNNI-----VEDVERKREFYIPPEPSN----------------- 209
            |||......|    ||||.:..|::     .||||...|..|.....|                 
 Worm    23 GDGIEQEMNRVTNGNEDDESVGNDVAEPMETEDVEDSGEVEIEETAQNGEREIFKVLGKQEMKNL 87

  Fly   210 DAIEIFSSGIASGIHFSKY--NNIPVKVTGSDVPQ------------PIQHFTSADLRDIIIDNV 260
            :|:::.||.:.:...||..  ::...|::..::|:            |:|:   |.|..:..:  
 Worm    88 EALKVTSSWVQNATTFSATIDSSTSQKLSQIELPEHLTVPSAISTWFPVQY---AVLPSLFFE-- 147

  Fly   261 NKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVS 325
                .:.|.|::.         ||:...|.||||||..::||:|:.:...|.::    .|.||:.
 Worm   148 ----IRSPPPLRP---------RDVAIAAPTGSGKTICYVLPVLAAVGSKPSKI----LQAVILV 195

  Fly   326 PTRELAIQIFNEARKFAFES-YLKIGIVYGGTSF-RHQNECITRGCHVVIATPGRLLDFVDRTF- 387
            |.:.|..||.:|.:::..|| ..|:..:.|...| :...:..:...:|::|||.||:..:.... 
 Worm   196 PVQTLVAQIVDEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIP 260

  Fly   388 --ITFEDTRFVVLDEADRM--------LDM-----GFSEDMRRIMTHVTMRPEHQTLMFSATFPE 437
              |.....||:::||||||        ||:     |..|.:..:...:..|...|.::.|||..:
 Worm   261 PPIDLSKLRFLIVDEADRMGKLMREEWLDLVEFLCGGMERVACLKDIIRQRRAPQKIVLSATLSK 325

  Fly   438 EIQRM-AGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKRSKLIEILSEQA------------ 489
            :::.: .....|..:|.|..:   :..|:...|.:|:..:.|..|...:|.:.            
 Worm   326 DVEELHLWNLFKPRLFSATAV---SVKDITSGIPQVDHVSGRLALPSSISHRLVVTDPKFHPLAV 387

  Fly   490 ---------DGTIVFVETKRGADFLASFLS-------EKEFPTTSIHGDRLQSQREQALRDFKNG 538
                     :.|::||.....::.||..|.       |.::.|..:.|.|    |.:.|..|...
 Worm   388 YQQITRNKFNRTLIFVNEVSSSNRLAHVLKELCKDQFEVDYFTAQLFGKR----RYKMLEKFNKN 448

  Fly   539 SMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAA 603
            ..:|||.:.|.:||.|:..:..||||::|:....:|||.|||||.|.:|...|..|.|..| :..
 Worm   449 ENRVLICSDVLARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAGQDGYVISVGDKESKR-LFV 512

  Fly   604 DLVKILEGSGQTVPD 618
            .::|:....|.||.:
 Worm   513 KMLKVTNLWGDTVEE 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_001260458.1 DEADc 247..454 CDD:238167 56/225 (25%)
DEXDc 260..467 CDD:214692 56/225 (25%)
Helicase_C 475..584 CDD:278689 36/136 (26%)
ZK686.2NP_498690.2 DEXDc 130..352 CDD:214692 60/246 (24%)
DEAD 135..330 CDD:278688 56/216 (26%)
HELICc 371..502 CDD:238034 36/134 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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