Protein Alignment vas and ddx-52

DIOPT Version :9

• Sequence 1: NP_001260458.1
• Gene: vas / 26067080
• FlyBaseID: FBgn0283442
• Length: 661
• Species: Drosophila melanogaster
• Sequence 2: NP_492326.1
• Gene: ddx-52 / 172651
• WormBaseID: WBGene00011032
• Length: 581
• Species: Caenorhabditis elegans
• Alignment Length: 505
• Identity: 133/505 - (26%)
• Similarity: 248/505 - (49%)
• Gaps: 58/505 - (11%)

  Fly   139 DERRGRLD--REERGGERRGRLDREERGGERGERGDGGFARRRRNEDDINNNNNIVE---DVERK 198
            :|...|.|  ||:..|:...:::::.:..::....:...:|:|.::.|.::.|.:.|   |||::
 Worm    36 EESLRRYDELREKMIGKVESKIEKKVKKNKKKASIEILASRKRVHDSDGDSENEVEETVGDVEKR 100

  Fly   199 REFYIPPEPSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKS 263
            .:..:      |.|.             :.|.|  ...|..:|..|..|:.:.:...:::.::::
 Worm   101 MQKLL------DDIR-------------RTNRI--FTWGDHLPNIILRFSDSSMSPSLLNRLSEN 144

  Fly   264 GYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLE-----DPHELELGRPQVVI 323
            ..:.|:|||..|||.::..|:::|.|.||||||.||.||::.::||     |.......:...|:
 Worm   145 SIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVV 209

  Fly   324 VSPTRELAIQIFNEARKFAFESYLKIGIVYG-GTSFRHQNECITRGCHVVIATPGRLLDFVDRTF 387
            :.||||||.|.:.|..|:...:.:......| .|..:|.:        ::::||.|::..:|:
 Worm   210 LEPTRELAAQTYTEFLKYCANTSISAANFSGEETDIQHAD--------ILVSTPNRIVFHLDK-- 264

  Fly   388 ITFEDTRFVVLDEADRMLDMGFSED--MRRIMTHVTMRPE---HQTLMFSATFPEEIQRMAGEFL 447
            |.....|::|:||:||:.::...:|  .|..:..:....:   .:...|||||..|:::...|.:
 Worm   265 IDTSSLRWLVVDESDRLFEVVEGQDKCFRNQLAAIYKACDAKCTRVAFFSATFSHEVEKWCKENI 329

  Fly   448 KNYVFVAIGIVGGACSDVKQTI-----YEVNKYAKRSKLIEILSEQADGTIVFVETKRGADFLAS 507
            .....|.:|....:.:.|||.:     .:..|.|.|:.|.......|   :|||::|..|..|..
 Worm   330 DEIGMVCVGERNSSNTSVKQKLTYCGTEDGKKIAIRNLLRTSFKPPA---LVFVQSKDRAVQLVK 391

  Fly   508 FLS--EKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKI 570
            .||  :......||:..:...:|::.:..|:.|.:.||:.|.:..||||:.::..|||||:|:.|
 Worm   392 LLSAIDSNLKVDSINSGKSDKERDETMERFRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSI 456

  Fly   571 DDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQTVPDFL 620
            ..|:||:|||||.|.:|.|.::| .:.|......:..::..||..||::|
 Worm   457 VSYIHRVGRTGRAGKSGHAVTYF-TDADMKYIKSIATVIRQSGFDVPEYL 505

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vas	NP_001260458.1	DEADc	247..454	CDD:238167	57/217 (26%)
		DEXDc	260..467	CDD:214692	59/217 (27%)
		Helicase_C	475..584	CDD:278689	39/110 (35%)
ddx-52	NP_492326.1	PTZ00424	124..505	CDD:185609	112/394 (28%)
		P-loop_NTPase	128..327	CDD:304359	56/208 (27%)
		HELICc	352..478	CDD:238034	43/128 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910