DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vas and AgaP_AGAP010656

DIOPT Version :9

Sequence 1:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster
Sequence 2:XP_311375.4 Gene:AgaP_AGAP010656 / 1272463 VectorBaseID:AGAP010656 Length:968 Species:Anopheles gambiae


Alignment Length:597 Identity:157/597 - (26%)
Similarity:246/597 - (41%) Gaps:177/597 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 GGFRGRLYENEDGDERRGRLDREERGGERRGRLD------------------------------- 159
            |..:..|.::|:.||.....|:.:...|....:|                               
Mosquito   199 GAKKWSLEDDEEDDETEDAKDKADGAAEEEEEIDPLDAFMKEVNEEVRKVNKLSNPLPKTDGKAS 263

  Fly   160 --------------REERGGERGERGDGG--FARRRRNEDDINNNNNIVEDVER----------- 197
                          :|.:.||..|:...|  ::.....||..:...|:....::           
Mosquito   264 SSGVTIITGVAKQKQETKKGELIEQNQDGLEYSSEEEQEDIKDTAANLANKQKKELAKIDHSGIN 328

  Fly   198 ----KREFYIP-PEPSN------DAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHFTSAD 251
                ::.||:. ||.:.      ||.:....|||              |.|...|:||:.:....
Mosquito   329 YMPFRKSFYVEVPEIARMTQTEIDAYKKELEGIA--------------VKGKGCPKPIKTWAHCG 379

  Fly   252 LRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELEL 316
            :.....:.:.|.|::.|||||..:||.|.|||||:..|:||||||.||:||:...||:.| .||.
Mosquito   380 VSRKEFEVLRKLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHLLDQP-PLED 443

  Fly   317 G-RPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLL 380
            | .|..:|::|||||.:||..:.:||:....|:...|||||....|...:.||..:::.||||::
Mosquito   444 GDGPIAIIMTPTRELCMQIGKDIKKFSKSLNLRTACVYGGTGISEQIAELKRGAEIIVCTPGRMI 508

  Fly   381 DFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHV-TMRPEHQTLMFSATFPEEIQRMAG 444
            |.:                    ..:.|...::||:|..: .:||:.||:|||||||.:::.:|.
Mosquito   509 DML--------------------AANSGRVTNLRRVMRIIDNVRPDRQTVMFSATFPRQMEALAR 553

  Fly   445 EFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKRSKLIEILS--EQADGTIVFVETKRGADFLAS 507
            ..||..:.|.:|.....|.||:|.:..::..||..||:|:|.  ::....||||:.:..||.|..
Mosquito   554 RILKKPIEVQVGGRSVVCKDVEQHVVVLDDEAKFFKLLELLGIYQEQGSIIVFVDKQENADSLLK 618

  Fly   508 FLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKIDD 572
            .|.:..:|..|:||                              |:|        .:|.    ||
Mosquito   619 DLMKASYPCMSLHG------------------------------GID--------QFDR----DD 641

  Fly   573 YVHRIGRTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQTVPDFLR----TCGAGGD----- 628
            |             |.|.:|..||:.| .:.|:::.||.||.|||:.||    |..|..:     
Mosquito   642 Y-------------GFAWTFLTPEQGR-YSGDIIRALELSGGTVPEDLRNLWDTYKAAQEAEGKK 692

  Fly   629 ----GGYSNQNF 636
                ||:|.:.|
Mosquito   693 VHTGGGFSGKGF 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vasNP_001260458.1 DEADc 247..454 CDD:238167 75/208 (36%)
DEXDc 260..467 CDD:214692 80/208 (38%)
Helicase_C 475..584 CDD:278689 24/110 (22%)
AgaP_AGAP010656XP_311375.4 DEADc 375..562 CDD:238167 75/207 (36%)
DEXDc 388..577 CDD:214692 80/209 (38%)
P-loop_NTPase 584..>641 CDD:304359 21/98 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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