DRSC/TRiP Functional Genomics Resources

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Protein Alignment solo and ddx3xb

DIOPT Version :9

Sequence 1:NP_001027274.2 Gene:solo / 26067079 FlyBaseID:FBgn0283440 Length:1031 Species:Drosophila melanogaster
Sequence 2:XP_005168845.1 Gene:ddx3xb / 30116 ZFINID:ZDB-GENE-980526-150 Length:721 Species:Danio rerio


Alignment Length:898 Identity:174/898 - (19%)
Similarity:274/898 - (30%) Gaps:343/898 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 GGYRGGNRDG--GGFHGGRREGERDFRGGEGGFRGGQGGSRGGQGGSRGGQGGFRGGEGGFRGRL 132
            ||:..|..:|  .|:|.||..            |...|.|..|:|..|..    |||.|||||: 
Zfish    51 GGWDNGRSNGFVNGYHDGRDN------------RMNGGSSFAGRGPIRSD----RGGRGGFRGK- 98

  Fly   133 YENEDAKELPPIPSS---CDKDEVGAFIDQLDLSKYTTSLALIRKLRDYLLTAFKALVNQAWASL 194
             .......:.|:.|:   .|..|.|.:                ...:|....:|....::..:| 
Zfish    99 -STASYNPIQPMQSAGFGYDNKEAGGW----------------NVPKDNAYNSFGGRSDRGKSS- 145

  Fly   195 EKLAQEKRAQKAHQIRETTDMMNRLMEDMGRLIREGEHEEANGIGMGFQSIDADCRADLSQWRNL 259
                                    ...|.|...| |.:|. .|.|.|..          |:|   
Zfish   146 ------------------------FFNDRGSSSR-GRYER-GGFGGGGN----------SRW--- 171

  Fly   260 QQVVMPQSSEIRDGQTNRTSGTEGGRSGGLTDGDDLTEIQSAAYAVYHQVLDRGYQTGRRL--YD 322
                   ..|.||                    :|.::.......:.|::.. |..||...  ||
Zfish   172 -------VEECRD--------------------EDWSKPLPPNERLEHELFS-GSNTGINFEKYD 208

  Fly   323 DNQGALREDSIPTEDREHPENNQVDGSTYGVTRFLHWLSENFVTRHEIRAVRFGSPHMVFQSYDW 387
            |         ||.|...|.....:|       || |.|....:....|...|:..|         
Zfish   209 D---------IPVEATGHNGPQPID-------RF-HDLEMGEIIMGNINLSRYTRP--------- 247

  Fly   388 PESPKQHISTVHQKGIFYSQPLIRTR----------------IIATVASEPNNSSSGQLSSMVNL 436
                     |..||   ::.|:|:::                .:..|.|:......|:..     
Zfish   248 ---------TPVQK---HAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGEAL----- 295

  Fly   437 ARHQRSQNQETPDGIYVSRYNATGDEETPCSATGVPGRVVALRASSTPNEHRSDPGLSFIPNLTY 501
               |.::|....:|.|..|      ::.|.|....|.|.:||:..   :|.|         ..:|
Zfish   296 ---QAAKNSAQENGKYGRR------KQYPISLVLAPTRELALQIY---DEAR---------KFSY 339

  Fly   502 EDGTIPSLAAGGAASTPLAPSLPAEHSLG-----LEMDSNTLVVPADADETRLVGHPGSTVVRSR 561
            .....|.:..|||             .:|     ||...:.||    |...|||    ..:.|.:
Zfish   340 RSHVRPCVVYGGA-------------DIGQQIRDLERGCHLLV----ATPGRLV----DMMERGK 383

  Fly   562 LGGPPASTPLL---------SFRPRLPVIDEEHHLRFTRVSRELQMSVAFPPEETTLSEQREWGS 617
            :|....:..:|         .|.|::..|.|:..:....:.:.:..|..||.|...|:       
Zfish   384 IGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMFSATFPKEIQILA------- 441

  Fly   618 IFRPRDEMVNY---AEGPPPRQTQRARRRSRTRRRRNRIASAASPQLTPERIVRREEAFQSSRHI 679
                ||.:.:|   |.|                    |:.| .|..:| :::|..||..:.|   
Zfish   442 ----RDFLEDYIFLAVG--------------------RVGS-TSENIT-QKVVWVEENDKRS--- 477

  Fly   680 AATFMSSLLQNAA---GEVTTSSGLAVTRSVKEITTSVHITRNVLQEEVPPTTEATTTSLEVAQA 741
               |:..|| ||.   .||..|:|.:|.:..|:..|.|.:       |.....:|....|     
Zfish   478 ---FLLDLL-NATVIPSEVQESTGESVEKPGKDSLTLVFV-------ETKKGADALEDFL----- 526

  Fly   742 TGYSDSGACMQSAAFSQDLPVVAPLEISGNASSDQASFDQALALLPPINSTPIGQHPIAVFGPKT 806
              |.:..||               ..|.|:.|  |...::||      :....|:.||.|     
Zfish   527 --YREGYAC---------------TSIHGDRS--QRDREEAL------HQFRSGRCPILV----- 561

  Fly   807 EIEIKPQKMDISNMMNTSVPPMPMEVDEVPLEVSNT--LANMSDHAYVTDIQILPSLQLNSLNLV 869
            ...:..:.:||||:.:.....:|.:::|....:..|  :.|:             .|..:..|..
Zfish   562 ATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNL-------------GLATSFFNDK 613

  Fly   870 STNITDNAVNIAPSTSTNDLQTPSDRRTSMQNQLYRVSMNDLAYISQHANVVR 922
            :.|||.:.::|......   :.||             .:..|||..||.:..|
Zfish   614 NGNITKDLLDILVEAKQ---EVPS-------------WLESLAYEHQHKSSSR 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
soloNP_001027274.2 None
ddx3xbXP_005168845.1 DEADc 226..452 CDD:238167 56/305 (18%)
DEXDc 239..466 CDD:214692 59/327 (18%)
Helicase_C 502..601 CDD:278689 26/140 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D595675at2759
OrthoFinder 1 1.000 - - FOG0000634
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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