DRSC/TRiP Functional Genomics Resources

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Protein Alignment solo and Ddx4

DIOPT Version :10

Sequence 1:NP_001027274.2 Gene:solo / 26067079 FlyBaseID:FBgn0283440 Length:1031 Species:Drosophila melanogaster
Sequence 2:XP_011242920.1 Gene:Ddx4 / 13206 MGIID:102670 Length:738 Species:Mus musculus


Alignment Length:292 Identity:67/292 - (22%)
Similarity:94/292 - (32%) Gaps:136/292 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DDWDDE----------PIVD----TRGARGGDWSDDEDTAKSFSGEAEGDGVGG-----SGGEGG 48
            :||:.|          |:.:    :.||.|..::....::..|:.|.| ||..|     ..|...
Mouse     4 EDWEAEILKPHVSSYVPVFEKDKYSSGANGDTFNRTSASSVLFALEME-DGPSGRDDFMRSGFPS 67

  Fly    49 GYQGGNRDV-----------FGRIGGGRGGGAGGY------------------------------ 72
            |...|:||:           .|..|.|:|.|..|:                              
Mouse    68 GRSLGSRDIGESSKKENTSTTGGFGRGKGFGNRGFLNNKFEEGDSSGFWKESNNDCEDNQTRSRG 132

  Fly    73 ---RGGNRDG------GGFHGGRREGERDFRGGEGGFRGG---------QGGSRGG--------- 110
               |||.:||      |.|   ||.|...|||..|||..|         ||..|||         
Mouse   133 FSKRGGCQDGNDSEASGPF---RRGGRGSFRGCRGGFGLGRPNSESDQDQGTQRGGGLFGSRKPA 194

  Fly   111 ---------------QGGSRGGQGGFRG-----------------GEGGFRGRLYENEDAK---- 139
                           |..|..|:||::|                 .|||      |:.|::    
Mouse   195 ASDSVQCLTGNGDTYQSRSGSGRGGYKGLNEEVVTGSGKNSWKSETEGG------ESSDSQGPKV 253

  Fly   140 -ELPPIPSSCDKDEVGA-FIDQLDLSKYTTSL 169
             .:||.|.. |:|.:.| :...::..||.|.|
Mouse   254 TYIPPPPPE-DEDSIFAHYQTGINFDKYDTIL 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
soloNP_001027274.2 None
Ddx4XP_011242920.1 DEADc_DDX4 266..518 CDD:350810 5/19 (26%)
SF2_C_DEAD 524..653 CDD:350174
Blue background indicates that the domain is not in the aligned region.

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