DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG46280 and Trabd

DIOPT Version :10

Sequence 1:NP_650253.1 Gene:CG46280 / 26067077 FlyBaseID:FBgn0283438 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001365686.1 Gene:Trabd / 67976 MGIID:1915226 Length:441 Species:Mus musculus


Alignment Length:359 Identity:156/359 - (43%)
Similarity:216/359 - (60%) Gaps:26/359 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 LLHTSKQKLDISIAEASAAADGD-------GEKRDLVSVI-DQPQTKREITIYDTIEEFE----- 235
            :||.|.........|...|.:.|       |....:..|: ..||...::..::.:.|.:     
Mouse    55 ILHQSGSCCPAMEGEEKPAQEADVEPVVTAGTSEAVPRVLAGDPQNISDVDAFNLLLEMKLKRRR 119

  Fly   236 --QNLPSTVTLLNTPFGSKVYLVGTAHFSEESQDDVSYVIRNVRPDVVMVELCPSRIHILKLDEK 298
              .|||.|||.|....||:||:|||||||::|:.||...||.|:||||:||||..|:.:||:||:
Mouse   120 ERPNLPRTVTQLVAEDGSRVYVVGTAHFSDDSKRDVVKTIREVQPDVVVVELCQYRVSMLKMDER 184

  Fly   299 TLLEEAKSINIPKIRGILHTHGYINGIFFILLLQMSAQIAKDLGMAPGGEFRRAFEEIHKLPGCI 363
            |||.|||.:::.|::..:..:|.::|:..:|||::||.|.:.||||||||||.||:|..|:|.|.
Mouse   185 TLLREAKEVSLEKLQQAVRQNGLMSGLMQMLLLKVSAHITEQLGMAPGGEFREAFKEASKVPFCK 249

  Fly   364 LHLGDRPIRITLYRALRALSMWQTMKLVWRLTF-TDSISIEEVEECKQSDLLEKLMQEMAGEFPA 427
            .|||||||.:|..||:.|||.||.:||.|.|.| :|.||.::||.|||.||||::|.||.||||.
Mouse   250 FHLGDRPIPVTFKRAIAALSFWQKVKLAWGLCFLSDPISKDDVERCKQKDLLEQMMAEMIGEFPD 314

  Fly   428 FSDVFVRERDVFLCHSLQLAA----LPQAAPG-GQQVRPVRVVGVVGIGHANGIAKMWGTVDPKK 487
            .....|.||||:|.:.|:.||    ||:|:.. .::..|..||||||:||..||.|.|.|  ...
Mouse   315 LHRTIVSERDVYLTYMLRQAARRLELPRASDAEPRKCVPSVVVGVVGMGHVPGIEKNWST--DLN 377

  Fly   488 IPAILEIPPASLGQRVCKYTLK---YGLIGLGCY 518
            |..|:.:||.|:..||.:..:|   :||:|...|
Mouse   378 IQEIMTVPPPSISGRVSRVAVKAAFFGLLGYSLY 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG46280NP_650253.1 TraB_PrgY-like 253..480 CDD:350608 122/232 (53%)
TrabdNP_001365686.1 TraB_PrgY-like 139..337 CDD:350608 107/197 (54%)

Return to query results.
Submit another query.