Protein Alignment SdicC and dync1i2b

DIOPT Version :10

• Sequence 1: NP_001303578.1
• Gene: SdicC / 26067076
• FlyBaseID: FBgn0283434
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: XP_009300385.2
• Gene: dync1i2b / 561612
• ZFINID: ZDB-GENE-090121-1
• Length: 645
• Species: Danio rerio
• Alignment Length: 536
• Identity: 280/536 - (52%)
• Similarity: 362/536 - (67%)
• Gaps: 62/536 - (11%)

  Fly    23 PLNLSVYNVQATNIPPKETLVYTKQTQT-TSTGGGNGDVLAFDAQGDDEESSLQNLGNGFTSKLP 86
            ||.|.:..|...:.||||.:.|:|:||| |.|           ...:|||..
Zfish   145 PLKLGMSKVTQVDFPPKEMVSYSKETQTPTQT-----------HHKEDEEEE------------- 185

  Fly    87 PGYLTHGLPTVKDVA---PAITPLEIKKETEVKKEV--NELSEEQKQMIILSENFQRFVVRAGRV 146
                       :|:|   |.:.|.|.|...:.:.|.  :||:||:||.|:.||.|..|...:.|:
Zfish   186 -----------EDLAVMQPVMEPQEEKDSQKEEDEASPHELTEEEKQQILHSEEFVTFFDHSSRI 239

  Fly   147 IERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPKLVVG 211
            :||||||.||::.||.|....::..:.::.|:|||||.|.||||||:|.:|.:|||..:|:|:|.
Zfish   240 MERALSEQVDVFFDYSGRDLQDKEGESQAGAKLSLNRQFADERWSKHRVVTCLDWSPQYPELLVA 304

  Fly   212 SYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDN 276
            ||.:|||:|:|||||.:|||.|:||:|||.||||||||||..||:|:|||::|||||||||||||
Zfish   305 SYCSNEEAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSAAFAQFHPNLVVGGTYSGQIVLWDN 369

  Fly   277 RVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQR 341
            |..||||:|||||||:||||||||:.:||||||||:||||:|||:|||||||||.|||:|||..:
Zfish   370 RSNKRTPVQRTPLSASAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSTPQDSLELVFK 434

  Fly   342 QSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPD 406
            |||::|:|||:||..::|:.|:|||||.||:|.|||.::|::|::|.|.|||||:..|......|
Zfish   435 QSKSVAVTSMSFPLGDVNNFVVGSEDGSVYTACRHGSKAGISEMFEGHHGPITGLDCHTAAGPVD 499

  Fly   407 FGHLFLTSSIKIWSLKLPISSCQFSVVSGINSNKPLYSFEDNSDYMMDVAWSPVHPALFAAVDGS 471
            |.|||:|||.. |::||          .|..:|||||||||||||:.||.|||.||||||.|||.
Zfish   500 FSHLFVTSSFD-WTVKL----------WGTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGV 553

  Fly   472 GRLDLWNLNQDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRD-- 534
            |.|||||||.:|||||||:.|.|.||||||.|..||..|.:||..|:|::|||.|.::.|.:|
Zfish   554 GHLDLWNLNNETEVPTASVTVEGNPALNRVRWAHSGREVAVGDSEGQLHIYDVGEQISVPRQDEW 618

  Fly   535 --------EIKMNQSD 542
                    ||..|:.|
Zfish   619 TRFVRTLTEINENRED 634

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdicC	NP_001303578.1	Dynein_IC2	21..51	CDD:463291	13/28 (46%)
		WD40	196..523	CDD:475233	208/326 (64%)
		WD40 repeat	196..245	CDD:293791	29/48 (60%)
		WD40 repeat	251..289	CDD:293791	28/37 (76%)
		WD40 repeat	298..337	CDD:293791	30/38 (79%)
		WD40 repeat	349..386	CDD:293791	20/36 (56%)
		WD40 repeat	393..446	CDD:293791	22/52 (42%)
		WD40 repeat	452..491	CDD:293791	29/38 (76%)
		WD40 repeat	498..522	CDD:293791	12/23 (52%)
dync1i2b	XP_009300385.2	None