DRSC/TRiP Functional Genomics Resources

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Protein Alignment SdicC and LOC4576277

DIOPT Version :10

Sequence 1:NP_001303578.1 Gene:SdicC / 26067076 FlyBaseID:FBgn0283434 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_001237748.2 Gene:LOC4576277 / 4576277 VectorBaseID:AGAMI1_000491 Length:693 Species:Anopheles gambiae


Alignment Length:575 Identity:122/575 - (21%)
Similarity:219/575 - (38%) Gaps:149/575 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QATNIPPKETLVYTK--QTQTTSTGGGNGDVLAFDAQGDDEESSLQNLGNGFTSKLPPGYLTHGL 94
            |..::|.|...|.|:  ..|..::...|.|:  :|...|.|.         .|.::         
Mosquito   179 QTRDLPCKSRSVNTECIHRQDVASFVSNYDM--YDTYNDLER---------HTKEI--------- 223

  Fly    95 PTVKDVAPAITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSENV---- 155
                :||.:.:.|||  .|..::.:.::.|...:    :.||.    .:..:::|.|:.||    
Mosquito   224 ----NVADSASKLEI--TTYSREGMEDIDERLNR----NANFH----LSSMILQRLLAGNVYREQ 274

  Fly   156 -----DIYTDYIGGGDSEEANDERSHARLSLNRVFYDERW------SKNRCITSMDWSTHFPKLV 209
                 ::|.      ......|.|...||       |..|      :..:.:.|..|......:|
Mosquito   275 QIRFRNMYP------PDPCREDIRYLYRL-------DVLWTYRTVETLGKPVASASWCPANGDIV 326

  Fly   210 VGSY--HNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIV 272
            ..:|  :.:..|.:...|.|.|||.| ....||..:.....|....|::..|.|:..|.|.|:: 
Mosquito   327 ALAYGIYGHTGSDDRGCGFVYVWNIK-NPVNPERRYRFDCPVTCVAFSRRTPQLLAVGLYDGRV- 389

  Fly   273 LWDNRVQKRTPIQRTPLSAAAHT-----HPVYCLQMVGTQN--AHNVISISSDGKLCSWSLD--- 327
                :|:..|...:|||:.:...     .|::.|:.|...|  ...||::|.:|.:..::|.   
Mosquito   390 ----QVRDITDTTQTPLAVSNRDRFPVYQPIWDLKWVEFDNEGKDEVIAVSQNGWVMKYTLTIGQ 450

  Fly   328 -MLSQPQDTLELQQRQSKAIAITSMAFPAN----------------------EINSLVMGSEDGY 369
             :|..|...|:..:...:....|..:.||:                      :.:...:|:::|.
Mosquito   451 YLLPYPLLRLDRVEGTPEGQTSTGTSAPADQQPVRVQSDLHPQALCVTIHPVQKDKYYIGTDEGA 515

  Fly   370 VYSASRHGLRSGVNEVYERHLGPI----TGI-STHYNQLSPDFGHLFLTS----SIKIWSLKLP- 424
            |:..|       :|:.:: |||.:    .|| ...|:..||   .:|||.    ||:||..:|| 
Mosquito   516 VHWCS-------INDPFQ-HLGVLQMHSRGIFCLEYSPWSP---RIFLTCSGDWSIRIWIEELPE 569

  Fly   425 --ISSCQFSVVSGINSNKPLYSFEDNSDYMMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPT 487
              ::.|     :|....:..|             |||.:..:.|:|..|| :.||:|.:.:..|.
Mosquito   570 PIVTLC-----TGFAPIQAAY-------------WSPTNSTVIASVTRSG-VQLWDLKRRSSKPA 615

  Fly   488 ASIVVAG-APALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRDEIKMNQS 541
            :...:.. ..||..|.:|..|..:.:||..||.:|. ..|::..|...:.:..||
Mosquito   616 SETTLGSLTTALTVVRFTNCGRCLLVGDAEGKAHVC-ALEDMPFPPHFQYRELQS 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdicCNP_001303578.1 Dynein_IC2 21..51 CDD:463291 6/20 (30%)
WD40 196..523 CDD:475233 86/374 (23%)
WD40 repeat 196..245 CDD:293791 13/50 (26%)
WD40 repeat 251..289 CDD:293791 9/37 (24%)
WD40 repeat 298..337 CDD:293791 10/44 (23%)
WD40 repeat 349..386 CDD:293791 8/58 (14%)
WD40 repeat 393..446 CDD:293791 17/64 (27%)
WD40 repeat 452..491 CDD:293791 11/38 (29%)
WD40 repeat 498..522 CDD:293791 8/23 (35%)
LOC4576277XP_001237748.2 WD40 <294..650 CDD:441893 89/398 (22%)
WD40 repeat 368..406 CDD:293791 11/42 (26%)
WD40 repeat 416..489 CDD:293791 14/72 (19%)
WD40 repeat 497..533 CDD:293791 8/43 (19%)
WD40 repeat 538..574 CDD:293791 13/38 (34%)
WD40 repeat 581..621 CDD:293791 12/53 (23%)
WD40 repeat 627..664 CDD:293791 11/37 (30%)

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