Protein Alignment SdicC and sw

DIOPT Version :10

• Sequence 1: NP_001303578.1
• Gene: SdicC / 26067076
• FlyBaseID: FBgn0283434
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_477075.2
• Gene: sw / 44160
• FlyBaseID: FBgn0003654
• Length: 663
• Species: Drosophila melanogaster
• Alignment Length: 586
• Identity: 505/586 - (86%)
• Similarity: 512/586 - (87%)
• Gaps: 65/586 - (11%)

  Fly     9 LRSTYSTLSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAF---------- 63
            |::|.:..|||||||||||||||||||||||||||||||||||||||||||||:.
  Fly    93 LQATVNGQSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLSCHSSPLSGYME 157

  Fly    64 --------------------------DAQGDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAP 102
                                      |...|||||||||||||||||||||||||||||||||||
  Fly   158 DWWRPRKAHATDYYDEYNLNPGLEWEDEFTDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAP 222

  Fly   103 AITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGDS 167
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   223 AITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGDS 287

  Fly   168 EEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPKLVVGSYHNNEESPNEPDGVVMVWNT 232
            |||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||||
  Fly   288 EEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNT 352

  Fly   233 KFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHP 297
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   353 KFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHP 417

  Fly   298 VYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLV 362
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   418 VYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLV 482

  Fly   363 MGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGHLFLTSS----IKIWSLKL 423
            |||||||||||||||||||||||||||||||||||||||||||||||||||||    ||:||||
  Fly   483 MGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGHLFLTSSIDWTIKLWSLK- 546

  Fly   424 PISSCQFSVVSGINSNKPLYSFEDNSDYMMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTA 488
                          ..||||||||||||:||||||||||||||||||||||||||||||||||||
  Fly   547 --------------DTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTA 597

  Fly   489 SIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRD----------EIKMNQSDE 543
            ||||||||||||||||||||||||||||||||||||||||||||||          |||||||||
  Fly   598 SIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRDEWSRFNTHLSEIKMNQSDE 662

  Fly   544 V 544
            |
  Fly   663 V 663

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdicC	NP_001303578.1	Dynein_IC2	21..51	CDD:463291	29/29 (100%)
		WD40	196..523	CDD:475233	306/330 (93%)
		WD40 repeat	196..245	CDD:293791	47/48 (98%)
		WD40 repeat	251..289	CDD:293791	37/37 (100%)
		WD40 repeat	298..337	CDD:293791	38/38 (100%)
		WD40 repeat	349..386	CDD:293791	36/36 (100%)
		WD40 repeat	393..446	CDD:293791	34/56 (61%)
		WD40 repeat	452..491	CDD:293791	37/38 (97%)
		WD40 repeat	498..522	CDD:293791	23/23 (100%)
sw	NP_477075.2	Dynein_IC2	105..135	CDD:463291	29/29 (100%)
		WD40	316..632	CDD:475233	306/330 (93%)
		WD40 repeat	316..365	CDD:293791	47/48 (98%)
		WD40 repeat	371..409	CDD:293791	37/37 (100%)
		WD40 repeat	418..457	CDD:293791	38/38 (100%)
		WD40 repeat	469..555	CDD:293791	78/100 (78%)
		WD40 repeat	561..599	CDD:293791	36/37 (97%)
		WD40 repeat	607..633	CDD:293791	25/25 (100%)