DRSC/TRiP Functional Genomics Resources

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Protein Alignment SdicC and CG15701

DIOPT Version :10

Sequence 1:NP_001303578.1 Gene:SdicC / 26067076 FlyBaseID:FBgn0283434 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_611100.1 Gene:CG15701 / 36801 FlyBaseID:FBgn0034095 Length:1051 Species:Drosophila melanogaster


Alignment Length:567 Identity:102/567 - (17%)
Similarity:176/567 - (31%) Gaps:207/567 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 STGGGNGDVLAFDAQG---DDEESSLQNLGNGFTSKLPPGY-----LTHGLPTVKDVAPAITPLE 108
            |.|..|...:|...|.   |.|..:|:.......::.||.|     |:..:....|...:..|.:
  Fly   415 SYGKLNASQVATQTQSPHMDGECQTLEVHSRSSWTQHPPHYGGQFVLSCSVDAELDETWSKQPAD 479

  Fly   109 IKKETEVKK--EVNELSEEQKQMIILS--------ENFQRFVVRAGRVIERALS----------- 152
             :.|..:.:  :::.|.:.:.|.:...        |....|:.||||::...|.           
  Fly   480 -EYEASISRLEQLHRLEQARSQQLQQKRLAKSTDLERLNSFLHRAGRLMGLVLEGKTTAHGQGNS 543

  Fly   153 -ENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPKLVVGSYHNN 216
             .||.:.|..:..              |.:.|:|                         ||..|.
  Fly   544 PRNVPLQTGLLNA--------------LPVRRIF-------------------------GSAGNG 569

  Fly   217 E------ESPNEPD-------GVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYS 268
            :      |.|.:.:       .::|||:.. ..|.|..:....:.|.....:....::::.|...
  Fly   570 QLVVTVHECPADSNVYKEDFASLLMVWSLA-NPSQPLRLLSTWAEVSRVALSAQAQDIVVAGLRD 633

  Fly   269 GQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQ 333
            |.:.:||.|                .||. ||.::              ||.|..:     :..|
  Fly   634 GSVAMWDLR----------------ETHS-YCSKL--------------DGHLTHF-----AATQ 662

  Fly   334 DTLELQQRQSKAIAITSMAFPANEINSLVMGS-----------EDGYVYSASRHGLRSGVNEVYE 387
            ..:.:.::|.|            |:|::.:|:           ..|.|  |:..||::...||..
  Fly   663 SVVPMPEQQDK------------EVNAMDLGAVVDVRSFRSHLNAGGV--AATSGLQTTYKEVQY 713

  Fly   388 RHL---GPIT-------GISTHYNQLSPDFGHLFLTSSIKIWSLKLPISSCQF----------SV 432
            ..|   |.:|       ..||:.|:.|..:..:.|..|          .||..          |.
  Fly   714 ASLNDSGLLTMWTLVEGASSTNSNEFSSPWARVKLLQS----------GSCDLRSYLERRLLKSH 768

  Fly   433 VSGINSNKPLYSFEDNSDYMMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTASIVVAGAPA 497
            .|.....|.|:.....||   ||                    |..|| ||:..|.::...|...
  Fly   769 QSAYEKTKSLFQGNIYSD---DV--------------------LRELN-DTQTLTTALQGQGLQG 809

  Fly   498 LNRVSWTPSG---LHVCIGDEAGKLYVYDVAENLAQPSRDEIKMNQS 541
            | |.:...:|   ::||    ..:.:|.....:|.......|.:|:|
  Fly   810 L-RFTSIDTGSELIYVC----TNRNFVLCCTRSLKTERFARIAVNES 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdicCNP_001303578.1 Dynein_IC2 21..51 CDD:463291
WD40 196..523 CDD:475233 68/373 (18%)
WD40 repeat 196..245 CDD:293791 10/61 (16%)
WD40 repeat 251..289 CDD:293791 5/37 (14%)
WD40 repeat 298..337 CDD:293791 6/38 (16%)
WD40 repeat 349..386 CDD:293791 9/47 (19%)
WD40 repeat 393..446 CDD:293791 13/69 (19%)
WD40 repeat 452..491 CDD:293791 8/38 (21%)
WD40 repeat 498..522 CDD:293791 5/26 (19%)
CG15701NP_611100.1 PTZ00108 <23..270 CDD:240271
Blue background indicates that the domain is not in the aligned region.

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