DRSC/TRiP Functional Genomics Resources

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Protein Alignment SdicC and Sdic4

DIOPT Version :9

Sequence 1:NP_001303578.1 Gene:SdicC / 26067076 FlyBaseID:FBgn0283434 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_001368966.1 Gene:Sdic4 / 2768886 FlyBaseID:FBgn0053499 Length:554 Species:Drosophila melanogaster


Alignment Length:554 Identity:543/554 - (98%)
Similarity:544/554 - (98%) Gaps:10/554 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLVLIKFLRSTYSTLSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAFDA 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MGLVLIKFLRSTYSTLSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAFDA 65

  Fly    66 QGDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAPAITPLEIKKETEVKKEVNELSEEQKQMI 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    66 QGDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAPAITPLEIKKETEVKKEVNELSEEQKQMI 130

  Fly   131 ILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRC 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   131 ILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRC 195

  Fly   196 ITSMDWSTHFPKLVVGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPN 260
            |||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   196 ITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPN 260

  Fly   261 LILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWS 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   261 LILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWS 325

  Fly   326 LDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHL 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   326 LDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHL 390

  Fly   391 GPITGISTHYNQLSPDFGHLFLTSSIKIWSLKLPISSCQFSVVSGINSNKPLYSFEDNSDYMMDV 455
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   391 GPITGISTHYNQLSPDFGHLFLTSSIKIWSLKLPISSCQFSVVSGINSNKPLYSFEDNSDYMMDV 455

  Fly   456 AWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLY 520
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   456 AWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLY 520

  Fly   521 VYDVAENLAQPSRD----------EIKMNQSDEV 544
            ||||||||||||||          ||||||||||
  Fly   521 VYDVAENLAQPSRDEWSRFNTHLSEIKMNQSDEV 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdicCNP_001303578.1 Dynein_IC2 23..51 CDD:288403 27/27 (100%)
NtpH 108..>178 CDD:225368 69/69 (100%)
WD40 196..523 CDD:295369 325/326 (100%)
WD40 repeat 196..245 CDD:293791 47/48 (98%)
WD40 <224..534 CDD:225201 309/309 (100%)
WD40 repeat 251..289 CDD:293791 37/37 (100%)
WD40 repeat 298..337 CDD:293791 38/38 (100%)
WD40 repeat 349..386 CDD:293791 36/36 (100%)
WD40 repeat 393..446 CDD:293791 52/52 (100%)
WD40 repeat 452..491 CDD:293791 38/38 (100%)
WD40 repeat 498..522 CDD:293791 23/23 (100%)
Sdic4NP_001368966.1 Dynein_IC2 23..51 CDD:402922 27/27 (100%)
WD40 196..523 CDD:421866 325/326 (100%)
WD40 repeat 196..245 CDD:293791 47/48 (98%)
WD40 repeat 251..289 CDD:293791 37/37 (100%)
WD40 repeat 298..337 CDD:293791 38/38 (100%)
WD40 repeat 349..446 CDD:293791 96/96 (100%)
WD40 repeat 452..490 CDD:293791 37/37 (100%)
WD40 repeat 498..524 CDD:293791 25/25 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439673
Domainoid 1 1.000 50 1.000 Domainoid score I18819
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 624 1.000 Inparanoid score I842
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54336
OrthoDB 1 1.010 - - D1453532at2759
OrthoFinder 1 1.000 - - FOG0001314
OrthoInspector 1 1.000 - - mtm6471
orthoMCL 1 0.900 - - OOG6_101571
Panther 1 1.100 - - P PTHR12442
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X812
1110.910

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