DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment SdicB and FY

DIOPT Version :9

Sequence 1:	NP_001303577.1	Gene:	SdicB / 26067075	FlyBaseID:	FBgn0283433	Length:	533	Species:	Drosophila melanogaster
Sequence 2:	NP_001318555.1	Gene:	FY / 831191	AraportID:	AT5G13480	Length:	657	Species:	Arabidopsis thaliana

Alignment Length:	375	Identity:	90/375 - (24%)
Similarity:	132/375 - (35%)	Gaps:	90/375 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   176 HARLSLNRVFYDERWSKNRC-ITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNTKFKKSTP 239
            ||  |||         |||| |..:.|:.....|:.||          ..|...:||.  :....
plant   127 HA--SLN---------KNRCSINRVLWTPSGRRLITGS----------QSGEFTLWNG--QSFNF 168

  Fly   240 EDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMV 304
            |.:.......:.:.....|.|.::.|...|.:..|.|.      :.....:..||...:..|...
plant   169 EMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNN------MNNVKANKTAHKESIRDLSFC 227

  Fly   305 GTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQRQSKAIAITSMAFPANEI------NSLVM 363
            .|           |.|.||.|.|...:..|..:.....|    :|...:....:      :.||.
plant   228 KT-----------DLKFCSCSDDTTVKVWDFTKCVDESS----LTGHGWDVKSVDWHPTKSLLVS 277

  Fly   364 GSEDGYVYSASRHGLRSGVNEVYERHLGPITG-----ISTHYNQLSPDFGHLFLTSSIDWTIKLW 423
            |.:|..|   .....|||      |.|..:.|     :|..:||    .|:..||:|.|..|||:
plant   278 GGKDQLV---KLWDTRSG------RELCSLHGHKNIVLSVKWNQ----NGNWLLTASKDQIIKLY 329

  Fly   424 SLKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLW---NLNQDTEVPIASIVVAGAP 485
            .::..|.|.||..::..|..:||.|.|...|.:....|.:..|   :.|...|:|.|..
plant   330 DIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHD------ 388

  Fly   486 ALNRV---SWTPSGLHVCIG--DEAGKLYVYD-VAENLAQPSRDEIKMNQ 529
              |.|   :|.|.|..:|.|  |...|.:..: .|:|    .||.:..||
plant   389 --NSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRPADN----PRDVLMQNQ 432

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
SdicB	NP_001303577.1	Dynein_IC2	23..51	CDD:288403
		NtpH	108..>178	CDD:225368	1/1 (100%)
		WD40	196..512	CDD:295369	75/334 (22%)
		WD40 repeat	196..245	CDD:293791	9/48 (19%)
		WD40	<224..523	CDD:225201	72/318 (23%)
		WD40 repeat	251..289	CDD:293791	6/37 (16%)
		WD40 repeat	298..337	CDD:293791	9/38 (24%)
		WD40 repeat	349..435	CDD:293791	26/96 (27%)
		WD40 repeat	441..479	CDD:293791	12/40 (30%)
		WD40 repeat	487..513	CDD:293791	9/31 (29%)
FY	NP_001318555.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910