DRSC/TRiP Functional Genomics Resources

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Protein Alignment SdicB and Dnai1

DIOPT Version :10

Sequence 1:NP_001303577.1 Gene:SdicB / 26067075 FlyBaseID:FBgn0283433 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_780347.2 Gene:Dnai1 / 68922 MGIID:1916172 Length:701 Species:Mus musculus


Alignment Length:459 Identity:108/459 - (23%)
Similarity:220/459 - (47%) Gaps:43/459 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 KDVAPAITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSENV--DIYTD 160
            |:...|.||  :.|:|| |..:.:|:..:.|    |::..: |.:|.:::||.:::|.  |:..|
Mouse   246 KEKEKAKTP--VAKKTE-KMAMRKLTSMESQ----SDDITK-VTQAAKIVERMVNQNTYDDVAQD 302

  Fly   161 YIGGGDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPEL-VVGSYHNNEESPNEPD 224
            :....|:.:...::....|.|.:...|:  :|...:|::.|:..:.:| .||  |.:.:...:..
Mouse   303 FKYYEDTADEYRDQEGTLLPLWKFQNDK--AKRLAVTALCWNPKYKDLFAVG--HGSYDFMKQSR 363

  Fly   225 GVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPL 289
            |::::::.| ..|.||.:|..:|.:|.......:|.|::.|.|.|.:.:::.:.....|..|:..
Mouse   364 GMLLLYSMK-NPSFPEYMFSSESGIMCLDVHVDHPYLVVVGYYDGNVAIYNLKKPHSQPCFRSTS 427

  Fly   290 SAAAHTHPVYCLQMVGTQNAHNV--ISISSDGKLCSWSL--------DM--LSQPQDTLELQQRQ 342
            .:..||.||:.::.......||:  .|:||||::.||:|        |:  |.....|.|:.:..
Mouse   428 KSGKHTDPVWQVKWQKDDMDHNLNFFSVSSDGRIVSWTLVKSELVHIDIIKLKTEGSTTEIPEGL 492

  Fly   343 SKAIAITSMAFPAN-EINSL-VMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSP 405
            .........||..: ||:.: ::|:|:|.:|..|: ...|...:.|:.|...:..:     ..:|
Mouse   493 QLHTVGCGTAFDFHKEIDYMFLVGTEEGKIYKCSK-SYSSQFLDTYDAHNMAVDAV-----LWNP 551

  Fly   406 DFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNL-- 468
            ....:|::.|.|||:|:|......|::.::.|| .|.||||:|....:||||...|:..:::|  
Mouse   552 YHTKVFMSCSSDWTVKIWDHTIKTPMFIYDLNS-AVGDVAWAPYSSTVFAAVTTDGKAHVFDLAV 615

  Fly   469 NQDTEVPIASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRD----EIKMNQ 529
            |:...:....:|......:..|.:.|....:.:||:.|.:....::.||.:..::    |::...
Mouse   616 NKYEAICNQPVVAKKKNKITHVQFNPIHPIIIVGDDRGHIICLKLSPNLRKMPKEKKGQEVQKGP 680

  Fly   530 SDEV 533
            :.|:
Mouse   681 AVEI 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdicBNP_001303577.1 Dynein_IC2 21..51 CDD:463291
WD40 196..512 CDD:475233 81/332 (24%)
WD40 repeat 196..245 CDD:293791 12/49 (24%)
WD40 repeat 251..289 CDD:293791 7/37 (19%)
WD40 repeat 298..337 CDD:293791 14/50 (28%)
WD40 repeat 349..435 CDD:293791 21/87 (24%)
WD40 repeat 441..479 CDD:293791 13/39 (33%)
WD40 repeat 487..513 CDD:293791 5/25 (20%)
Dnai1NP_780347.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 119..165
WD40 repeat 336..382 CDD:293791 11/48 (23%)
WD40 <354..612 CDD:475233 67/265 (25%)
WD 1 382..422 7/39 (18%)
WD40 repeat 388..429 CDD:293791 8/40 (20%)
WD 2 431..474 14/42 (33%)
WD40 repeat 436..493 CDD:293791 15/56 (27%)
WD40 repeat 501..538 CDD:293791 10/37 (27%)
WD 3 539..579 10/44 (23%)
WD40 repeat 544..581 CDD:293791 9/41 (22%)
WD 4 581..621 15/40 (38%)
WD40 repeat 586..627 CDD:293791 13/40 (33%)
WD 5 629..668 7/38 (18%)
Blue background indicates that the domain is not in the aligned region.

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