DRSC/TRiP Functional Genomics Resources

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Protein Alignment SdicB and dync2i2

DIOPT Version :9

Sequence 1:NP_001303577.1 Gene:SdicB / 26067075 FlyBaseID:FBgn0283433 Length:533 Species:Drosophila melanogaster
Sequence 2:XP_012823678.1 Gene:dync2i2 / 448417 XenbaseID:XB-GENE-953027 Length:503 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdicBNP_001303577.1 Dynein_IC2 23..51 CDD:288403
NtpH 108..>178 CDD:225368
WD40 196..512 CDD:295369
WD40 repeat 196..245 CDD:293791
WD40 <224..523 CDD:225201
WD40 repeat 251..289 CDD:293791
WD40 repeat 298..337 CDD:293791
WD40 repeat 349..435 CDD:293791
WD40 repeat 441..479 CDD:293791
WD40 repeat 487..513 CDD:293791
dync2i2XP_012823678.1 WD40 repeat 131..182 CDD:293791
WD40 184..481 CDD:392136
WD40 repeat 188..227 CDD:293791
WD40 repeat 236..297 CDD:293791
WD40 repeat 305..355 CDD:293791
WD40 repeat 362..399 CDD:293791
WD40 repeat 405..446 CDD:293791
WD40 repeat 452..477 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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