DRSC/TRiP Functional Genomics Resources

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Protein Alignment SdicB and Dnai2

DIOPT Version :10

Sequence 1:NP_001303577.1 Gene:SdicB / 26067075 FlyBaseID:FBgn0283433 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001030050.2 Gene:Dnai2 / 432611 MGIID:2685574 Length:623 Species:Mus musculus


Alignment Length:475 Identity:120/475 - (25%)
Similarity:199/475 - (41%) Gaps:105/475 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 GLPTVKDVAPAITPLEIKKETEVKKEVNELSEEQKQMIILSENFQRFVVRAGRVIERALSEN--V 155
            |.|  |||    .|.|:::....:|:|.:           .||:...|::.|.::|..:.:|  :
Mouse    80 GWP--KDV----NPQELEQTIRFRKKVEK-----------DENYINAVMQLGSIMEHCIKQNNAI 127

  Fly   156 DIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPE----LVVG----- 211
            |||.:|....::.|..:|...|: ::| ||.|.:..| |..|.:.|   .|:    |.|.     
Mouse   128 DIYEEYFDDEEAVEVTEEAPSAK-TIN-VFRDPQEIK-RTATHLSW---HPDGNRKLAVAYSCLK 186

  Fly   212 -----------SYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNP---NLI 262
                       ||..:.|:||.|:       ...|..:|            ....::||   :::
Mouse   187 FQRAPMSMNYDSYIWDLENPNRPE-------IALKPLSP------------LVTLEYNPKDSHVL 232

  Fly   263 LGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLD 327
            |||.|:|||..||.|  |.:.:........:|..|||....:.::......|.|:||::..|.:.
Mouse   233 LGGCYNGQIACWDTR--KGSLVAELSTIEFSHRDPVYGTIWLQSKTGTECFSASTDGQVMWWDIR 295

  Fly   328 MLSQPQDT----LELQQRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEV--Y 386
            .:|:|.:.    :..:::...|:...|:.|.:......::|:|.|.|.|.:|.........|  :
Mouse   296 KISEPIEVVIMDISRKEQLENALGAISLEFESTLPTKFMVGTEQGIVISCNRKAKTQAEKIVCTF 360

  Fly   387 ERHLGPITGISTHYNQLSPDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSD-----------Y 440
            ..|.|||..:     |.:|.:...|||.. |||.::||          ||:.:           |
Mouse   361 YGHHGPIYAL-----QRNPFYPKNFLTVG-DWTARIWS----------EDSRESSIMWTKYHMAY 409

  Fly   441 VMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPIASIVVAGAPAL-NRVSWTPSGLHVCIGDE 504
            :.|.|||||.||:|......|.||:|:|......|..|:.|...|.. .||.  .:|..:..|.|
Mouse   410 LSDGAWSPVRPAVFFTTKMDGTLDIWDLVFKQCDPALSLKVCDDPLFCLRVQ--DNGCLIACGSE 472

  Fly   505 AGKLYVYDVAENLAQPSRDE 524
            .|...:.:|:.:|:...|:|
Mouse   473 LGTTTLLEVSSSLSTLQRNE 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdicBNP_001303577.1 Dynein_IC2 21..51 CDD:463291
WD40 196..512 CDD:475233 88/356 (25%)
WD40 repeat 196..245 CDD:293791 13/68 (19%)
WD40 repeat 251..289 CDD:293791 13/40 (33%)
WD40 repeat 298..337 CDD:293791 9/42 (21%)
WD40 repeat 349..435 CDD:293791 23/87 (26%)
WD40 repeat 441..479 CDD:293791 15/37 (41%)
WD40 repeat 487..513 CDD:293791 6/26 (23%)
Dnai2NP_001030050.2 WD40 repeat 165..212 CDD:293791 11/56 (20%)
WD40 166..472 CDD:475233 86/347 (25%)
WD 1 214..254 15/53 (28%)
WD40 repeat 220..259 CDD:293791 13/40 (33%)
WD 2 261..302 11/40 (28%)
WD40 repeat 266..361 CDD:293791 19/94 (20%)
WD40 repeat 318..351 CDD:293791 8/32 (25%)
WD 3 362..401 16/54 (30%)
WD40 repeat 367..403 CDD:293791 13/51 (25%)
WD 4 405..445 15/39 (38%)
WD40 repeat 410..435 CDD:293791 12/24 (50%)
WD 5 450..489 10/40 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 565..602
Blue background indicates that the domain is not in the aligned region.

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