DRSC/TRiP Functional Genomics Resources

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Protein Alignment SdicB and SdicA

DIOPT Version :10

Sequence 1:NP_001303577.1 Gene:SdicB / 26067075 FlyBaseID:FBgn0283433 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001303576.1 Gene:SdicA / 26067074 FlyBaseID:FBgn0283432 Length:533 Species:Drosophila melanogaster


Alignment Length:330 Identity:253/330 - (76%)
Similarity:292/330 - (88%) Gaps:0/330 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLDFIESPQVYSNILYITSAFSLPIHIFGGYCILYKTPVIMKSVKWSLFNLHFWSFALDLTLSL 65
            |:||||||||||||||||||||||||||||||||||:|.|.|||||||||||:.||||||::|||
  Fly     1 MILDFIESPQVYSNILYITSAFSLPIHIFGGYCILYRTTVFMKSVKWSLFNLYLWSFALDISLSL 65

  Fly    66 FVQPYFCSPAFAGFPLGIVQWEKRIPTDILVIYVLAIFKIVPMTIISMFENRYFVLFVKKGPWRY 130
            |:|||||||||||||||||||.|.||.|:||:...||||:||::|||||||||||||..||.|:|
  Fly    66 FIQPYFCSPAFAGFPLGIVQWVKGIPMDVLVVCATAIFKVVPVSIISMFENRYFVLFGNKGLWQY 130

  Fly   131 LRYPFLLFNYTLALALCIPVYLEAPIDQENARRVLFETHSQACKVVVDKTRIFVMNYEENIWPSL 195
            ||||||:.||.|||..||.:|:|.|:||..||:.||::|.|||||:.||::|||||:||:|||::
  Fly   131 LRYPFLMLNYALALVYCISIYIEVPVDQNKARQFLFKSHPQACKVITDKSKIFVMNFEEDIWPAI 195

  Fly   196 RRNALNCFVLAEIIFLGVLLRVEMNRAIKNIQSSISLDTLQKQKIFIRALNLQIAIPIAIIFIPA 260
            |:|||..|||||||.||||:::||||||||||||:|||||||||..||||||||||||||||:||
  Fly   196 RQNALTSFVLAEIILLGVLIKMEMNRAIKNIQSSLSLDTLQKQKKCIRALNLQIAIPIAIIFLPA 260

  Fly   261 AIAAVLKMKSSSQQGIDNILNIITSLHGASATILMIYLQKPFRKVFLSIVCRGKQVESKNVTEMI 325
            .|:|:||||||||||:||:||:.|||||.||||||||||||:|..||.|.||||:|.||||..||
  Fly   261 VISAILKMKSSSQQGVDNLLNLTTSLHGVSATILMIYLQKPYRSAFLEIFCRGKRVTSKNVHMMI 325

  Fly   326 PSRLS 330
            |||||
  Fly   326 PSRLS 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdicBNP_001303577.1 Dynein_IC2 21..51 CDD:463291 26/29 (90%)
WD40 196..512 CDD:475233 107/135 (79%)
WD40 repeat 196..245 CDD:293791 38/48 (79%)
WD40 repeat 251..289 CDD:293791 29/37 (78%)
WD40 repeat 298..337 CDD:293791 24/33 (73%)
WD40 repeat 349..435 CDD:293791
WD40 repeat 441..479 CDD:293791
WD40 repeat 487..513 CDD:293791
SdicANP_001303576.1 Dynein_IC2 21..51 CDD:463291 26/29 (90%)
WD40 196..512 CDD:475233 107/135 (79%)
WD40 repeat 196..245 CDD:293791 38/48 (79%)
WD40 repeat 251..289 CDD:293791 29/37 (78%)
WD40 repeat 298..337 CDD:293791 24/33 (73%)
WD40 repeat 349..435 CDD:293791
WD40 repeat 441..479 CDD:293791
WD40 repeat 487..513 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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