DRSC/TRiP Functional Genomics Resources

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Protein Alignment SdicB and Dync1i2

DIOPT Version :9

Sequence 1:NP_001303577.1 Gene:SdicB / 26067075 FlyBaseID:FBgn0283433 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001185801.1 Gene:Dync1i2 / 13427 MGIID:107750 Length:655 Species:Mus musculus


Alignment Length:527 Identity:285/527 - (54%)
Similarity:369/527 - (70%) Gaps:52/527 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAFDAQGDDEESSLQNLGNGFTSKLPP 87
            |:.|.:..:...:.||:|.:.|||:|||..|.         ..:.|:||..              
Mouse   152 PIKLGMAKITQVDFPPREIVTYTKETQTPVTA---------QPKEDEEEED-------------- 193

  Fly    88 GYLTHGLPTVKDVAPAITPLEIKKETEVKKE--------VNELSEEQKQMIILSENFQRFVVRAG 144
                       |||....|:|.::|..:||:        .:||:||:||.|:.||.|..|...:.
Mouse   194 -----------DVATPKPPVEPEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHST 247

  Fly   145 RVIERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELV 209
            |::||||||.::|:.||.|....::..:.::.|:|||||.|:||||||:|.::.:|||:.:|||:
Mouse   248 RIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELL 312

  Fly   210 VGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLW 274
            |.||:||||:|:|||||.:|||.|:||:|||.||||||||||..||||:|||::|||||||||||
Mouse   313 VASYNNNEEAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLW 377

  Fly   275 DNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQ 339
            |||..||||:||||||||||||||||:.:||||||||:||||:|||:|||||||||.|||::||.
Mouse   378 DNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHPQDSMELV 442

  Fly   340 QRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLS 404
            .:||||:|:|||:||..::|:.|:|||:|.||:|.|||.::|::|::|.|.||||||..|....:
Mouse   443 HKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGA 507

  Fly   405 PDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNLN 469
            .||.|||:|||.|||:|||:.|:.|||||||||||||.||.|||.||||||.|||.|||||||||
Mouse   508 VDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRLDLWNLN 572

  Fly   470 QDTEVPIASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRD----------E 524
            .|||||.|||.|.|.||||||.||.||..:.:||..|::.:|||.|.:|.|..|          |
Mouse   573 NDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWARFGRTLAE 637

  Fly   525 IKMNQSD 531
            |..|::|
Mouse   638 INANRAD 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdicBNP_001303577.1 Dynein_IC2 23..51 CDD:288403 10/27 (37%)
NtpH 108..>178 CDD:225368 26/77 (34%)
WD40 196..512 CDD:295369 215/315 (68%)
WD40 repeat 196..245 CDD:293791 30/48 (63%)
WD40 <224..523 CDD:225201 205/298 (69%)
WD40 repeat 251..289 CDD:293791 29/37 (78%)
WD40 repeat 298..337 CDD:293791 30/38 (79%)
WD40 repeat 349..435 CDD:293791 48/85 (56%)
WD40 repeat 441..479 CDD:293791 30/37 (81%)
WD40 repeat 487..513 CDD:293791 12/25 (48%)
Dync1i2NP_001185801.1 Dynein_IC2 152..180 CDD:288403 10/27 (37%)
WD40 repeat 299..348 CDD:293791 30/48 (63%)
WD40 346..>616 CDD:225201 187/269 (70%)
WD40 repeat 356..394 CDD:293791 30/37 (81%)
WD40 397..>622 CDD:295369 147/224 (66%)
WD40 repeat 402..443 CDD:293791 31/40 (78%)
WD40 repeat 451..498 CDD:293791 24/46 (52%)
WD40 repeat 506..538 CDD:293791 20/31 (65%)
WD40 repeat 544..582 CDD:293791 30/37 (81%)
WD40 repeat 590..616 CDD:293791 12/25 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830612
Domainoid 1 1.000 379 1.000 Domainoid score I846
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 638 1.000 Inparanoid score I823
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54336
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001314
OrthoInspector 1 1.000 - - mtm8761
orthoMCL 1 0.900 - - OOG6_101571
Panther 1 1.100 - - O PTHR12442
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X812
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.900

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