DRSC/TRiP Functional Genomics Resources

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Protein Alignment SdicA and dic1

DIOPT Version :9

Sequence 1:NP_001303576.1 Gene:SdicA / 26067074 FlyBaseID:FBgn0283432 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001342791.1 Gene:dic1 / 5802757 PomBaseID:SPBC646.17c Length:544 Species:Schizosaccharomyces pombe


Alignment Length:573 Identity:153/573 - (26%)
Similarity:268/573 - (46%) Gaps:102/573 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LVLIKFLRS-TYSTLSGGKKQPLNLS---VYN-----VQATNIPPKETLVYTKQTQTTSTGGGNG 58
            |:|:|...: |.:..|..|:.|..:|   :.|     ::.||:.|:...:.:|.:...|      
pombe    16 LLLLKNKENCTDAVSSSNKEGPKQISEDQLSNFLCKILKPTNLTPQTYSLESKSSNLVS------ 74

  Fly    59 DVLAFDAQGDDEESSLQNLGNGFTSKLPPGYLTHGLPTV-KDVAPAITPLEIKKETEVKK----- 117
                      |.|..:.::...::|..   .:::.:|:: |.|....|...:|..|:..|     
pombe    75 ----------DCELKISSVYQSYSSTF---NVSNHVPSISKTVNIRETSKHLKHSTKAPKCSLPT 126

  Fly   118 ---EVNELSEEQKQMIILSENFQRFVVRAGRVIERAL-SENVDIYTDYIGGGDSEEANDERSHAR 178
               |::.|:              .|:..:.::::||| .::..::|||.....|::...:.....
pombe   127 SALEIDHLN--------------NFLHSSAKILDRALCDQSNQLFTDYTVKKKSKKNKSQLEENG 177

  Fly   179 LSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVF 243
            |:....|.||:.:.|..:.|:.:|:.|.||::.||...:|: ....|:.:|||.::|.| ||.|.
pombe   178 LNHLFTFQDEKITLNSVVNSISYSSFFEELLITSYAKPKEA-LRTRGLAIVWNQRWKNS-PESVL 240

  Fly   244 HCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQN 308
            ..:|.:.....:.|:|.||.||.|:||:.|||.| |.:.|:..|.:.:..|..||..:..:....
pombe   241 KARSEITVCKPSPFHPQLIAGGAYNGQVFLWDLR-QGQYPVSFTTIISGGHLEPVTDITYINNPP 304

  Fly   309 AHNVISISSDGKLCSWSLDMLSQPQDTLELQQR---QSKAIAITSMAF-PANEINSLVMGSEDGY 369
            ::|:::.|:||.:..|..||.|:|.:|:.|..:   .|:.|..|.::| |.|.:..|| |:|||.
pombe   305 SNNIVTCSTDGLVHIWEPDMFSRPSETICLSSQVDSSSQCIPATCLSFIPENNMEFLV-GAEDGK 368

  Fly   370 VYSASRHGLRSGVNEV---------YERHLGPITGI----STHYN---QLSPDFGHLFLTSSIDW 418
            :    :.|.||..:|.         ||.|...|:||    |...|   :.:.||.   ||||.||
pombe   369 L----QRGYRSDYSETKAVQPSNVSYEGHNVFISGIDVMTSNSQNVFLEKNKDFA---LTSSFDW 426

  Fly   419 TIKLWSLKDTKPLYSFEDNSD-----------------YVMDVAWSPVHPALFAAVDGSGRLDLW 466
            |::||....::..:....::|                 .|.||.|....|..||:||..|.|:||
pombe   427 TVRLWQCSPSRNQHELVPSNDLDEQVIINSCKTFTHKAMVFDVKWCVSEPCCFASVDALGNLNLW 491

  Fly   467 NLNQDTEVPIASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVY-DVAENLA 518
            :|.:|.|.|:.|.:..|.| ||:::|.|...::..|...|.:::| .::.|||
pombe   492 DLQKDVEAPVTSDIPDGKP-LNKIAWQPEKRNLACGGLNGNVHIYKHLSPNLA 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdicANP_001303576.1 Dynein_IC2 23..51 CDD:288403 7/35 (20%)
NtpH 108..>178 CDD:225368 13/78 (17%)
WD40 196..512 CDD:295369 111/353 (31%)
WD40 repeat 196..245 CDD:293791 17/48 (35%)
WD40 <224..523 CDD:225201 106/333 (32%)
WD40 repeat 251..289 CDD:293791 16/37 (43%)
WD40 repeat 298..337 CDD:293791 11/38 (29%)
WD40 repeat 349..435 CDD:293791 33/102 (32%)
WD40 repeat 441..479 CDD:293791 17/37 (46%)
WD40 repeat 487..513 CDD:293791 7/26 (27%)
dic1NP_001342791.1 WD40 223..536 CDD:330360 102/323 (32%)
WD40 repeat 247..289 CDD:293791 16/42 (38%)
WD40 repeat 294..339 CDD:293791 12/44 (27%)
WD40 repeat 348..390 CDD:293791 14/46 (30%)
WD40 repeat 397..453 CDD:293791 17/58 (29%)
WD40 repeat 466..504 CDD:293791 17/37 (46%)
WD40 repeat 511..535 CDD:293791 6/23 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1109
OMA 1 1.010 - - QHG54336
OrthoFinder 1 1.000 - - FOG0001314
OrthoInspector 1 1.000 - - otm47086
orthoMCL 1 0.900 - - OOG6_101571
Panther 1 1.100 - - O PTHR12442
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X812
TreeFam 00.000 Not matched by this tool.
98.970

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