DRSC/TRiP Functional Genomics Resources

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Protein Alignment SdicA and dync1i1

DIOPT Version :9

Sequence 1:NP_001303576.1 Gene:SdicA / 26067074 FlyBaseID:FBgn0283432 Length:533 Species:Drosophila melanogaster
Sequence 2:XP_009290517.1 Gene:dync1i1 / 561525 ZFINID:ZDB-GENE-061215-62 Length:647 Species:Danio rerio


Alignment Length:530 Identity:278/530 - (52%)
Similarity:365/530 - (68%) Gaps:47/530 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 TLSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAFDAQGDDEESSLQNLGN 79
            ::.|.:.|.|..|  .:...:..|||.:.|:|:|||......       ..:.||||.|      
Zfish   141 SVHGCRMQRLGAS--KIVQIDFMPKELVTYSKETQTPVASNQ-------PEEEDDEELS------ 190

  Fly    80 GFTSKLPPGYLTHGLPTVKDVAPAITPLEIKKETEVKKEVN--ELSEEQKQMIILSENFQRFVVR 142
                             |....||...||.:|..|| :||:  ||:.|:|:.|:.||:|..|..|
Zfish   191 -----------------VPKSEPASQQLEEEKTQEV-EEVHPRELTNEEKEQIVHSEDFLFFFDR 237

  Fly   143 AGRVIERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPE 207
            :.||:||.|:|:.||:.||.|....::..|.::.:.||.||.||||.|||:|.:||:|||..:||
Zfish   238 SIRVVERVLAEDKDIFFDYSGRDMEDKEGDLQAGSNLSFNRHFYDEHWSKHRVVTSLDWSPQYPE 302

  Fly   208 LVVGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIV 272
            |:|.||:.||::|:||||||:|||.||||:|||.:|||||:|||..||:|:|||::||||||||.
Zfish   303 LLVASYNTNEDAPHEPDGVVLVWNMKFKKATPEYIFHCQSSVMSVGFAQFHPNLVIGGTYSGQIA 367

  Fly   273 LWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLE 337
            :||||..:|||:|||||||.||||||||:.:||||||:|:|::|:|||:||||||||||||:::|
Zfish   368 MWDNRSHRRTPVQRTPLSATAHTHPVYCVNVVGTQNANNLITVSTDGKMCSWSLDMLSQPQESME 432

  Fly   338 LQQRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQ 402
            |...:||.:|:|.|||||:::|:.|:|||:|.||:|||||.::|:.|:::.|.||:||||.| |.
Zfish   433 LIYNKSKPVAVTCMAFPASDVNNYVVGSEEGTVYTASRHGSKAGIGEIFDGHQGPVTGISCH-NA 496

  Fly   403 LSP-DFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLW 466
            :.| ||.|||.|||.|||:||||.|..|||||||||:|||.||.||||||||||.|||:||||||
Zfish   497 VGPVDFSHLFTTSSFDWTVKLWSTKHNKPLYSFEDNADYVYDVMWSPVHPALFATVDGNGRLDLW 561

  Fly   467 NLNQDTEVPIASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRD-------- 523
            |||..||||.||:.|.|..|||||.|...|..|.:||..|::::|||.|.||.|..|        
Zfish   562 NLNNYTEVPSASVSVEGGCALNRVRWASGGREVAVGDSEGRVWIYDVGEQLAVPHTDDWSKFGRT 626

  Fly   524 --EIKMNQSD 531
              ||:.|:.|
Zfish   627 LMEIQANRGD 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdicANP_001303576.1 Dynein_IC2 23..51 CDD:288403 9/27 (33%)
NtpH 108..>178 CDD:225368 28/71 (39%)
WD40 196..512 CDD:295369 205/316 (65%)
WD40 repeat 196..245 CDD:293791 31/48 (65%)
WD40 <224..523 CDD:225201 196/299 (66%)
WD40 repeat 251..289 CDD:293791 25/37 (68%)
WD40 repeat 298..337 CDD:293791 27/38 (71%)
WD40 repeat 349..435 CDD:293791 52/86 (60%)
WD40 repeat 441..479 CDD:293791 30/37 (81%)
WD40 repeat 487..513 CDD:293791 11/25 (44%)
dync1i1XP_009290517.1 Dynein_IC2 147..175 CDD:288403 10/29 (34%)
WD40 215..608 CDD:225201 240/393 (61%)
WD40 284..607 CDD:295369 209/323 (65%)
WD40 repeat 292..337 CDD:293791 30/44 (68%)
WD40 repeat 347..388 CDD:293791 28/40 (70%)
WD40 repeat 394..437 CDD:293791 28/42 (67%)
WD40 repeat 443..490 CDD:293791 24/46 (52%)
WD40 repeat 498..530 CDD:293791 22/31 (71%)
WD40 repeat 536..574 CDD:293791 30/37 (81%)
WD40 repeat 582..608 CDD:293791 11/25 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573318
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 624 1.000 Inparanoid score I842
OMA 1 1.010 - - QHG54336
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001314
OrthoInspector 1 1.000 - - mtm6471
orthoMCL 1 0.900 - - OOG6_101571
Panther 1 1.100 - - O PTHR12442
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X812
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.900

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