DRSC/TRiP Functional Genomics Resources

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Protein Alignment SdicA and Sdic1

DIOPT Version :9

Sequence 1:NP_001303576.1 Gene:SdicA / 26067074 FlyBaseID:FBgn0283432 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_524670.2 Gene:Sdic1 / 43984 FlyBaseID:FBgn0067861 Length:517 Species:Drosophila melanogaster


Alignment Length:543 Identity:487/543 - (89%)
Similarity:490/543 - (90%) Gaps:36/543 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLVLIKFLRSTYSTLSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAFDA 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MGLVLIKFLRSTYSTLSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAFDA 65

  Fly    66 QGDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAPAITPLEIKKETEVKKEVNELSEEQKQMI 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    66 QGDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAPAITPLEIKKETEVKKEVNELSEEQKQMI 130

  Fly   131 ILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRC 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   131 ILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRC 195

  Fly   196 ITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPN 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   196 ITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPN 260

  Fly   261 LILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWS 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   261 LILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWS 325

  Fly   326 LDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHL 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   326 LDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHL 390

  Fly   391 GPITGISTHYNQLSPDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEDNSDYVMDVAWSPVHPALFA 455
            |||||||||||||||||||||||||||||||||||||||||||||..      :|||||.     
  Fly   391 GPITGISTHYNQLSPDFGHLFLTSSIDWTIKLWSLKDTKPLYSFEQY------IAWSPVR----- 444

  Fly   456 AVDGSGRLDLWNLNQDTEVPIASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQP 520
                         .|....|..:....|||||.|.|||||||  |||||||||||||||||||||
  Fly   445 -------------RQRPPGPDKTQPRHGAPALRRDSWTPSGL--CIGDEAGKLYVYDVAENLAQP 494

  Fly   521 SRD----------EIKMNQSDEV 533
            |||          ||||||.||:
  Fly   495 SRDEWSRFNTHLSEIKMNQGDEI 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SdicANP_001303576.1 Dynein_IC2 23..51 CDD:288403 27/27 (100%)
NtpH 108..>178 CDD:225368 69/69 (100%)
WD40 196..512 CDD:295369 271/315 (86%)
WD40 repeat 196..245 CDD:293791 48/48 (100%)
WD40 <224..523 CDD:225201 254/298 (85%)
WD40 repeat 251..289 CDD:293791 37/37 (100%)
WD40 repeat 298..337 CDD:293791 38/38 (100%)
WD40 repeat 349..435 CDD:293791 85/85 (100%)
WD40 repeat 441..479 CDD:293791 7/37 (19%)
WD40 repeat 487..513 CDD:293791 21/25 (84%)
Sdic1NP_524670.2 Dynein_IC2 23..51 CDD:288403 27/27 (100%)
NtpH 108..>178 CDD:225368 69/69 (100%)
WD40 196..>445 CDD:295369 245/272 (90%)
WD40 <196..442 CDD:225201 242/251 (96%)
WD40 repeat 196..245 CDD:293791 48/48 (100%)
WD40 repeat 251..289 CDD:293791 37/37 (100%)
WD40 repeat 298..337 CDD:293791 38/38 (100%)
WD40 repeat 349..386 CDD:293791 36/36 (100%)
WD40 repeat 393..435 CDD:293791 41/41 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439678
Domainoid 1 1.000 50 1.000 Domainoid score I18819
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 624 1.000 Inparanoid score I842
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54336
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001314
OrthoInspector 1 1.000 - - mtm6471
orthoMCL 1 0.900 - - OOG6_101571
Panther 1 1.100 - - P PTHR12442
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X812
109.900

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