Protein Alignment SdicA and SdicC

DIOPT Version :10

• Sequence 1: NP_001303576.1
• Gene: SdicA / 26067074
• FlyBaseID: FBgn0283432
• Length: 533
• Species: Drosophila melanogaster
• Sequence 2: NP_001303578.1
• Gene: SdicC / 26067076
• FlyBaseID: FBgn0283434
• Length: 544
• Species: Drosophila melanogaster
• Alignment Length: 548
• Identity: 523/548 - (95%)
• Similarity: 526/548 - (95%)
• Gaps: 19/548 - (3%)

  Fly     1 MGLVLIKFLRSTYSTLSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAFDA 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MGLVLIKFLRSTYSTLSGGKKQPLNLSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAFDA 65

  Fly    66 QGDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAPAITPLEIKKETEVKKEVNELSEEQKQMI 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    66 QGDDEESSLQNLGNGFTSKLPPGYLTHGLPTVKDVAPAITPLEIKKETEVKKEVNELSEEQKQMI 130

  Fly   131 ILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRC 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   131 ILSENFQRFVVRAGRVIERALSENVDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRC 195

  Fly   196 ITSMDWSTHFPELVVGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPN 260
            |||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   196 ITSMDWSTHFPKLVVGSYHNNEESPNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPN 260

  Fly   261 LILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWS 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   261 LILGGTYSGQIVLWDNRVQKRTPIQRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWS 325

  Fly   326 LDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHL 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   326 LDMLSQPQDTLELQQRQSKAIAITSMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHL 390

  Fly   391 GPITGISTHYNQLSPDFGHLFLTSSIDWTIKLWSLK---------------DTKPLYSFEDNSDY 440
            |||||||||||||||||||||||||    ||:||||               ..||||||||||||
  Fly   391 GPITGISTHYNQLSPDFGHLFLTSS----IKIWSLKLPISSCQFSVVSGINSNKPLYSFEDNSDY 451

  Fly   441 VMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPIASIVVAGAPALNRVSWTPSGLHVCIGDEA 505
            :||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
  Fly   452 MMDVAWSPVHPALFAAVDGSGRLDLWNLNQDTEVPTASIVVAGAPALNRVSWTPSGLHVCIGDEA 516

  Fly   506 GKLYVYDVAENLAQPSRDEIKMNQSDEV 533
            ||||||||||||||||||||||||||||
  Fly   517 GKLYVYDVAENLAQPSRDEIKMNQSDEV 544

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdicA	NP_001303576.1	Dynein_IC2	21..51	CDD:463291	29/29 (100%)
		WD40	196..512	CDD:475233	305/330 (92%)
		WD40 repeat	196..245	CDD:293791	47/48 (98%)
		WD40 repeat	251..289	CDD:293791	37/37 (100%)
		WD40 repeat	298..337	CDD:293791	38/38 (100%)
		WD40 repeat	349..435	CDD:293791	78/100 (78%)
		WD40 repeat	441..479	CDD:293791	35/37 (95%)
		WD40 repeat	487..513	CDD:293791	25/25 (100%)
SdicC	NP_001303578.1	Dynein_IC2	21..51	CDD:463291	29/29 (100%)
		WD40	196..523	CDD:475233	305/330 (92%)
		WD40 repeat	196..245	CDD:293791	47/48 (98%)
		WD40 repeat	251..289	CDD:293791	37/37 (100%)
		WD40 repeat	298..337	CDD:293791	38/38 (100%)
		WD40 repeat	349..386	CDD:293791	36/36 (100%)
		WD40 repeat	393..446	CDD:293791	34/56 (61%)
		WD40 repeat	452..491	CDD:293791	36/38 (95%)
		WD40 repeat	498..522	CDD:293791	23/23 (100%)