DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp1 and FAA2

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_010931.3 Gene:FAA2 / 856734 SGDID:S000000817 Length:744 Species:Saccharomyces cerevisiae


Alignment Length:695 Identity:148/695 - (21%)
Similarity:238/695 - (34%) Gaps:219/695 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 TVADVFERNVQAHPDKVAVVSE-----TQRW--TFR-----QVNEHANKV-------ANVLQAQG 222
            |..|.|..:.:..|.:..:.|.     |..|  |||     .|::..:.:       .|..:.:.
Yeast    94 TAYDHFMFSARRWPQRDCLGSRPIDKATGTWEETFRFESYSTVSKRCHNIGSGILSLVNTKRKRP 158

  Fly   223 YKKGD-VVALLLENRAEYVATWLGLSKIGVITPLINTNL---RGPSLL-HSITVAHCSALIYGED 282
            .:..| |||:|..|..|::.|.|......    |.||.|   .||:.. :.:.:.....||:.:.
Yeast   159 LEANDFVVAILSHNNPEWILTDLACQAYS----LTNTALYETLGPNTSEYILNLTEAPILIFAKS 219

  Fly   283 FLEAVTDVAKDLPANLTLF---QFNNENNNSETEKNIP-QAKNLNALLTTASYEKPNKTQVNHHD 343
            .:..|..:..|:....||.   :..::......|..:| :..:||..:|..|.|:..  ||...:
Yeast   220 NMYHVLKMVPDMKFVNTLVCMDELTHDELRMLNESLLPVKCNSLNEKITFFSLEQVE--QVGCFN 282

  Fly   344 KLVYI-----------YTSGTTGLPKAAVISHSRYLFIAAGIHYTMGFQEEDIFYTP-------- 389
            |:..|           :|||||||||...:||..   ||:||.:..     ..|..|        
Yeast   283 KIPAIPPTPDSLYTISFTSGTTGLPKGVEMSHRN---IASGIAFAF-----STFRIPPDKRNQQL 339

  Fly   390 -----LPLYHTAGGIMCMGQSVLFGSTVSIRKKFSASNYFADCAKYNATIGQYIGEMAR------ 443
                 |||.|            :|...|               ..|:..||..||.:.:      
Yeast   340 YDMCFLPLAH------------IFERMV---------------IAYDLAIGFGIGFLHKPDPTVL 377

  Fly   444 ---------YILATKPSEYDQKHRVRLVFGNGLRPQIWPQFVQRFNIA------KVGEFYGATEG 493
                     |.:|..|       |:...|..|::..:....||| |:|      |...|......
Yeast   378 VEDLKILKPYAVALVP-------RILTRFEAGIKNALDKSTVQR-NVANTILDSKSARFTARGGP 434

  Fly   494 NANIMNH--------DNTVGAIGFV--SRILPKIYPIS-----IIRADPDTGEPIRDRNGL---- 539
            :.:|||.        |....::|..  |.|:....|||     .:|:..|.|  ||...||    
Yeast   435 DKSIMNFLVYHRVLIDKIRDSLGLSNNSFIITGSAPISKDTLLFLRSALDIG--IRQGYGLTETF 497

  Fly   540 ------------------------CQLCAPNEPGVFIGKIVKG---------------NPSREFL 565
                                    |:|.:..|.|....|.:||               ||:.   
Yeast   498 AGVCLSEPFEKDVGSCGAIGISAECRLKSVPEMGYHADKDLKGELQIRGPQVFERYFKNPNE--- 559

  Fly   566 GYVDEKASAKKIVKD-VFKHGDMAFISGDLLVADEKGYLYFKDRTGDTFRW-KGENVSTSEVE-- 626
                   ::|.:.:| .|..||:|||.|       ||.:...||..:.|:. .||.::..::|  
Yeast   560 -------TSKAVDQDGWFSTGDVAFIDG-------KGRISVIDRVKNFFKLAHGEYIAPEKIENI 610

  Fly   627 -----AQVSNVAGYKD---TVVYGVTIPHTEGRAGMAAIYDPE-RELDLDVFAASLAKVLPAYAR 682
                 ..::.:..:.|   |.:.|:.....:....:.|...|| :....:|...:|.:  ....|
Yeast   611 YLSSCPYITQIFVFGDPLKTFLVGIVGVDVDAAQPILAAKHPEVKTWTKEVLVENLNR--NKKLR 673

  Fly   683 PQIIRLLTKV--DLTGTFKLRKVDLQKEGYDPNAIKDALYYQTSK 725
            .:.:..:.|.  .|.|..||..:   |.|.:|..::|.:...|.|
Yeast   674 KEFLNKINKCTDGLQGFEKLHNI---KVGLEPLTLEDDVVTPTFK 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 148/695 (21%)
hsFATP4_like 199..712 CDD:213305 139/653 (21%)
FAA2NP_010931.3 LC-FACS_euk 126..734 CDD:341250 141/663 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344294
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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