DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp1 and AT1G20500

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_173474.5 Gene:AT1G20500 / 838638 AraportID:AT1G20500 Length:550 Species:Arabidopsis thaliana


Alignment Length:566 Identity:126/566 - (22%)
Similarity:219/566 - (38%) Gaps:113/566 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 QAHPDKVAVVSET--QRWTFRQVNEHANKVANVLQAQ-GYKKGDVVALLLENRAEYVATWLGLSK 248
            |.|..|.|.:...  |..||..:....::||:.|..: |.::||||.:|..|........|.:..
plant    47 QPHRGKTAFIDAATGQCLTFSDLWRAVDRVADCLYHEVGIRRGDVVLILSPNSIFIPVVCLSVMS 111

  Fly   249 IGVITPLINT-NLRG----------PSLLHSITVAHCSALIYGEDFLEAVTDVAKDLPANLTLFQ 302
            :|.:....|| |..|          |:|:.:                  ...:|..||..:::..
plant   112 LGAVFTTANTLNTSGEISKQIADSNPTLVFT------------------TRQLAPKLPVAISVVL 158

  Fly   303 FNNENNNSETEKNIPQAKNLNALLTTASYEKPN----KTQVNHHDKLVYIYTSGTTGLPKAAVIS 363
                 .:.|..:.:..|..:..:|:....::|:    :.:||..|..:.:|:||||| |...|||
plant   159 -----TDDEVYQELTSAIRVVGILSEMVKKEPSGQRVRDRVNQDDTAMMLYSSGTTG-PSKGVIS 217

  Fly   364 HSRYLFIAAGIHYTMGFQEEDIFYTPLPLYHTAGGIMCMGQSVLFGSTVSIRKKFSASNYFADCA 428
            ..|.|........:...:.:|||...:|::||.|.:.....:|..||||.|.::|...:......
plant   218 SHRNLTAHVARFISDNLKRDDIFICTVPMFHTYGLLTFAMGTVALGSTVVILRRFQLHDMMDAVE 282

  Fly   429 KYNATIGQYIGEMARYILATKP--------------SEYDQKHRVRLVFGNG-LRPQIWPQFVQR 478
            |:.||           .||..|              ::||......:..|.. |..::...|:::
plant   283 KHRAT-----------ALALAPPVLVAMINDADLIKAKYDLSSLKTVRCGGAPLSKEVTEGFLEK 336

  Fly   479 FNIAKVGEFYGATEGN-----ANIMNHDNTVGAIG-FVSRILPKIYPISIIRADPDTGEPIR-DR 536
            :....:.:.|..||.|     .|........|..| ..|.:..:|       .||:||..:. ::
plant   337 YPTVDILQGYALTESNGGGAFTNSAEESRRYGTAGTLTSDVEARI-------VDPNTGRFMGINQ 394

  Fly   537 NGLCQLCAPNEPGVFIGKIVKGNPSREFLGYVDEKASAKKI-VKDVFKHGDMAFISGDLLVADEK 600
            .|...|..|:        |.||.       :.:::|:.:.| ::...|.||:.:|       ||.
plant   395 TGELWLKGPS--------ISKGY-------FKNQEATNETINLEGWLKTGDLCYI-------DED 437

  Fly   601 GYLYFKDRTGDTFRWKGENVSTSEVEAQVSNVAGYKDTVVYGVTIPHTEGRAG---MA-AIYDPE 661
            |:|:..||..:..::||..|..:|:||.:.......|..|    ||..:..||   || .:...|
plant   438 GFLFVVDRLKELIKYKGYQVPPAELEALLITHPDILDAAV----IPFPDKEAGQYPMAYVVRKHE 498

  Fly   662 RELDLDVFAASLAKVLPAYARPQIIRLLTKVDLTGTFKLRKVDLQK 707
            ..|........::|.:..|.:.:.:..:..:..|.:.|..:.||.|
plant   499 SNLSEKQVIDFISKQVAPYKKIRKVSFINSIPKTASGKTLRKDLIK 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 126/566 (22%)
hsFATP4_like 199..712 CDD:213305 122/554 (22%)
AT1G20500NP_173474.5 PLN02574 16..542 CDD:215312 123/562 (22%)
4CL 32..542 CDD:213272 123/562 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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