DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp1 and Slc27a5

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_077057.1 Gene:Slc27a5 / 79111 RGDID:708535 Length:690 Species:Rattus norvegicus


Alignment Length:637 Identity:233/637 - (36%)
Similarity:342/637 - (53%) Gaps:36/637 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 WIFAVLVALVALLL---TKPGWRWFYIAGATASRDLTALWAYIKLLRYTKRHERLNYTVADVFER 184
            |:.....||...||   ..|..||.:...|.|.:   .|:..:.|.|...||....:  .|..|:
  Rat    63 WLSLAAAALTLSLLPPRPPPELRWLHKDVAFAFK---LLFYGLNLRRRLNRHPPELF--VDALEQ 122

  Fly   185 NVQAHPDKVAVV---SETQRWTFRQVNEHANKVANVLQAQ------GYKKGDVVALLLENRA-EY 239
            ..||.||:||:|   ||....|.|::|..|.:.|..|:|:      ...||....|:|.::: ..
  Rat   123 QAQARPDQVALVCTGSEGCSITNRELNAKACQAAWALKAKLKEATIQEDKGATAILVLPSKSISA 187

  Fly   240 VATWLGLSKIGVITPLINTNLRGPSLLHSITVAHCSALIYGEDFLEAVTDV-AKDLPANLTLFQF 303
            ::.:|||:|:|.....||.:.||..||||:..:..|.||...|..|.:.:| .|.|..|:..|..
  Rat   188 LSVFLGLAKLGCPVAWINPHSRGMPLLHSVQSSGASVLIVDPDLQENLEEVLPKLLAENIRCFYL 252

  Fly   304 NNENNNSETEKNIPQAKNLNALLTTA-SYEKPNKTQVNHHDK--LVYIYTSGTTGLPKAAVISHS 365
               .::|.|    |..:.|.|.|..| |...|.|.:.|...|  .::|||||||||||.|::||.
  Rat   253 ---GHSSPT----PGVEALGAALDAAPSDPVPAKLRANIKWKSPAIFIYTSGTTGLPKPAILSHE 310

  Fly   366 RYLFIAAGIHYTMGFQEEDIFYTPLPLYHTAGGIMCMGQSVLFGSTVSIRKKFSASNYFADCAKY 430
            |.:.::..:.: .|...:|:.|..|||||:.|.::.:...:..|:|..:..|||||.|:|:|.:|
  Rat   311 RVIQMSNVLSF-CGRTADDVVYNVLPLYHSMGLVLGVLGCLQLGATCVLAPKFSASRYWAECRQY 374

  Fly   431 NATIGQYIGEMARYILATKPSEYDQKHRVRLVFGNGLRPQIWPQFVQRFNIAKVGEFYGATEGNA 495
            :.|:..|:||:.||:........|:||.||...|||||..:|..|.|||...::.|.||:||||.
  Rat   375 SVTVVLYVGEVLRYLCNVPGQPEDKKHTVRFALGNGLRADVWENFQQRFGPIQIWELYGSTEGNV 439

  Fly   496 NIMNHDNTVGAIGFVSRILPKIYPISIIRADPDTGEPIRDRNGLCQLCAPNEPGVFIGKIVKGNP 560
            .:||:....||:|..|..:..:.|:.:::.|.:|.||:||:.|.|......:||:.:.||.|..|
  Rat   440 GLMNYVGHCGAVGKTSCFIRMLTPLELVQFDIETAEPVRDKQGFCIPVETGKPGLLLTKIRKNQP 504

  Fly   561 SREFLGYVDEKASAK-KIVKDVFKHGDMAFISGDLLVADEKGYLYFKDRTGDTFRWKGENVSTSE 624
               ||||...:...| |:|.:|.:.||:.:.:||:|..|::|:.||:||.|||||||||||||.|
  Rat   505 ---FLGYRGSQDETKRKLVANVRQVGDLYYNTGDVLALDQEGFFYFRDRLGDTFRWKGENVSTRE 566

  Fly   625 VEAQVSNVAGYKDTVVYGVTIPHTEGRAGMAAI-YDPERELDLDVFAASLAKVLPAYARPQIIRL 688
            ||..:|.:...::..|||||:|..||:.||||: ..|.:..|.......:...|||||.|..||:
  Rat   567 VEGVLSILDFLEEVNVYGVTVPGCEGKVGMAAVKLAPGKTFDGQKLYQHVRSWLPAYATPHFIRI 631

  Fly   689 LTKVDLTGTFKLRKVDLQKEGYDPNAIKDALYYQTSKGR-YELLTPQVYDQV 739
            ...:::|.|:||.|..|.:||:|...|.|.||...:|.. :..|.|.||..|
  Rat   632 QDSLEITNTYKLVKSQLAREGFDVGVIADPLYILDNKAETFRSLMPDVYQAV 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 223/604 (37%)
hsFATP4_like 199..712 CDD:213305 196/525 (37%)
Slc27a5NP_077057.1 PRK08279 101..690 CDD:236217 222/596 (37%)
AFD_class_I 140..680 CDD:302604 204/550 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342904
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D298283at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43107
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X222
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.950

Return to query results.
Submit another query.