DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp1 and LOC568883

DIOPT Version :10

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_003199367.2 Gene:LOC568883 / 568883 -ID:- Length:618 Species:Danio rerio


Alignment Length:640 Identity:241/640 - (37%)
Similarity:357/640 - (55%) Gaps:38/640 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 MGWIFAVL-VALVALLLTK-PGWRWFYIAGATASRDLTALWAYIKL----LRYTKRHERLNYTVA 179
            |.|..:.| |.:|.||:.: ..:.:|:          ..|..|:|:    .|...|.:|...|..
Zfish     1 MSWAISTLAVGIVTLLIIQMKFYPYFW----------DDLMYYVKVRRVGWRMMARMKRGVVTYL 55

  Fly   180 DVFERNVQAHPDKVAVVSETQRWTFRQVNEHANKVANVLQA-QGYKKGDVVALLLENRAEYVATW 243
            ..||......|||..:|.|.|..|:|.|:..:||:||||:: :|.|.||:||||:.|.|:::..|
Zfish    56 QCFELQATNIPDKPFIVFEDQTLTYRDVDVRSNKLANVLKSHRGLKHGDIVALLMNNEADFICVW 120

  Fly   244 LGLSKIGVITPLINTNLRGPSLLHSITVAHCSALIYGEDFLEAVTDVAKDLPANLTLFQFNNE-- 306
            |||.|:|.....:|.|::..||.|.:.......|:.|.|.::::.:|.      |.|.....|  
Zfish   121 LGLCKLGCEVAFLNFNIKSQSLQHCLDRCGAKTLVIGSDLVKSLDEVL------LMLTDGGIEIW 179

  Fly   307 -NNNSETEKNIPQAKNLNALLTTASYEKP--NKTQVNHHDKLVYIYTSGTTGLPKAAVISHSRYL 368
             .:.|.:.:|:   |.|...|.:||.|||  :..|.|.....::|:|||||||||||.|||.:.:
Zfish   180 VASESSSHQNV---KTLLDKLDSASPEKPVVDAPQPNLMSNFLFIFTSGTTGLPKAARISHIKAV 241

  Fly   369 FIAAGIHYTMGFQEEDIFYTPLPLYHTAGGIMCMGQSVLFGSTVSIRKKFSASNYFADCAKYNAT 433
            ...|.:. ..|...:|..|..|||||.:..::.:|..:..|:|..:::|||||.::.||.||:.|
Zfish   242 MCMAFLR-LCGACADDKIYLTLPLYHMSASLLGIGGCIELGATCVLKRKFSASQFWKDCLKYDIT 305

  Fly   434 IGQYIGEMARYILATKPSEYDQKHRVRLVFGNGLRPQIWPQFVQRFNIAKVGEFYGATEGNANIM 498
            :.|||||:.||::....:..:..|.|||..|:|||..:|.:|::||...::.|.||.||.:...:
Zfish   306 VFQYIGELCRYLVNQPKTLEEVAHNVRLAAGSGLRADVWKEFIRRFGKIQIREAYGLTEASIGFV 370

  Fly   499 NHDNTVGAIGFVSRILPKIYPISIIRADPDTGEPIRDRNGLCQLCAPNEPGVFIGKIVKGNPSRE 563
            |:.:.:|.||..|.......|...::.||.|.||:|...|.|...:..|.|:.:..:|..||   
Zfish   371 NYTDEIGPIGRASYFNKLNLPFEFLKCDPQTFEPLRTDTGHCIKVSKGEAGLLVAPVVFTNP--- 432

  Fly   564 FLGYVDEKA-SAKKIVKDVFKHGDMAFISGDLLVADEKGYLYFKDRTGDTFRWKGENVSTSEVEA 627
            ||||..:|| |.||:::||||.||:.|.:|||::.|.:.::|||||.|||||||||||||:||..
Zfish   433 FLGYAGDKAMSEKKLLRDVFKTGDVYFNTGDLMLQDHRDFVYFKDRIGDTFRWKGENVSTTEVSE 497

  Fly   628 QVSNVAGYKDTVVYGVTIPHTEGRAGMAAIYDPE-RELDLDVFAASLAKVLPAYARPQIIRLLTK 691
            .:.::....|..|||||:|..||||||||:...: .|||.....:.|...||.||.|..:||.|.
Zfish   498 VLGSLDFLLDVNVYGVTVPGYEGRAGMAAVVLKDGHELDGKRVYSHLLHTLPPYAWPWFLRLQTS 562

  Fly   692 VDLTGTFKLRKVDLQKEGYDPNAIKDALY-YQTSKGRYELLTPQVYDQVQRNEIR 745
            :|:|.|||.:|..|.|:|:.|:.::..:| ..||:..|..||.|:||.|...:||
Zfish   563 LDMTDTFKQQKGLLVKQGFSPDTVQKPVYLLDTSQKTYTPLTAQLYDDVVSGKIR 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 hsFATP4_like 199..712 CDD:341262 206/520 (40%)
LOC568883XP_003199367.2 hsFATP2a_ACSVL_like 73..608 CDD:341261 215/547 (39%)

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