DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp1 and slc27a1b

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001070716.1 Gene:slc27a1b / 553512 ZFINID:ZDB-GENE-061013-672 Length:648 Species:Danio rerio


Alignment Length:658 Identity:301/658 - (45%)
Similarity:433/658 - (65%) Gaps:29/658 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 FRFFCATVAFGLAIACVIYTLHTMG--WIFAVLVALVALLLTKPGWRWFYIAGATASRDLTALWA 160
            ||...|.:..||        |..:|  |.:: ||:|:.:.|...|||:.|:|..||.|||..|..
Zfish     7 FRAPVALIIAGL--------LSALGVPWFWS-LVSLLGVYLCSGGWRFVYVAVRTAKRDLIGLQV 62

  Fly   161 YIKLLRYTKRHERLNYTVADVFERNVQAHPDKVAVVSET--QRWTFRQVNEHANKVANVLQAQGY 223
            .:::..|.:::.|...|:..:|.:.|..||:|.|:|.|:  :.|:|.:::..:|.||..:.|||:
Zfish    63 LLRVKFYMRQYIRNRSTIPSLFAQRVALHPEKAALVDESSGEVWSFSELDRRSNAVAQWVLAQGW 127

  Fly   224 KKGDVVALLLENRAEYVATWLGLSKIGVITPLINTNLRGPSLLHSITVAHCSALIYGEDFLEAVT 288
            :.|||||:.:|:|.:.||.|||::|:||...|||.|||..||:|.:.|:....:::|.:.|:.|.
Zfish   128 RSGDVVAIFMESRPQMVALWLGMAKVGVEPALINFNLRRDSLIHCMGVSGACGMVFGAELLDVVL 192

  Fly   289 DVAKDLPANLTLFQFNNENNNSETEKNIPQAKNLNALLTTASYEKP----NKTQVNHHDKLVYIY 349
            :|.:.| .:|:||...:.  .:|...:: .|.:|:|||:.:....|    ||   ..:|:|.|||
Zfish   193 EVRESL-RSLSLFSCGSA--PAEMLDSL-SAADLDALLSKSPETPPAVAHNK---GFNDRLFYIY 250

  Fly   350 TSGTTGLPKAAVISHSRYLFIAAGIHYTMGFQEEDIFYTPLPLYHTAGGIMCMGQSVLFGSTVSI 414
            |||||||||||::.||||..|||..:|:.|.|.:|:.|..|||||:||.|:.:||.:|.|.||.|
Zfish   251 TSGTTGLPKAAIVVHSRYYRIAAFSYYSFGLQPDDVVYCCLPLYHSAGNIIGVGQCLLHGLTVVI 315

  Fly   415 RKKFSASNYFADCAKYNATIGQYIGEMARYILA--TKPSEYDQKHRVRLVFGNGLRPQIWPQFVQ 477
            |:|||||.::.||.|||.|:.|||||:.||:|:  .:|||  ..||||:..||||||.:|..|::
Zfish   316 RRKFSASRFWDDCVKYNCTVVQYIGEICRYLLSQPVRPSE--SLHRVRVAMGNGLRPNVWESFMK 378

  Fly   478 RFNIAKVGEFYGATEGNANIMNHDNTVGAIGFVSRILPKIYPISIIRADPDTGEPIRDRNGLCQL 542
            ||::.::||||||||.|.::.|.||.|||.||.|.:||.:|||.::|||.||.|.|||..|||..
Zfish   379 RFSVKRIGEFYGATECNCSLANMDNKVGACGFNSVVLPSVYPIRLLRADEDTMELIRDSRGLCVP 443

  Fly   543 CAPNEPGVFIGKIVKGNPSREFLGYVDEKASAKKIVKDVFKHGDMAFISGDLLVADEKGYLYFKD 607
            |.|.|||:.:|:|...:|.|.|.||.:|:|::|||..:||:.||.|::||||:|.||.||:||:|
Zfish   444 CKPGEPGIIVGRINPQDPLRRFDGYANEEATSKKISHNVFRKGDSAYVSGDLMVMDELGYVYFRD 508

  Fly   608 RTGDTFRWKGENVSTSEVEAQVSNVAGYKDTVVYGVTIPHTEGRAGMAAIYDPERELDLDVFAAS 672
            |.||||||:||||||:|||..:|.:....|..||||::|..||:||||||.|||...|.:.|...
Zfish   509 RGGDTFRWRGENVSTTEVEGVLSALLKQTDVAVYGVSVPGVEGKAGMAAIADPENVFDCETFLRD 573

  Fly   673 LAKVLPAYARPQIIRLLTKVDLTGTFKLRKVDLQKEGYDPNAIKDALYYQTSK-GRYELLTPQVY 736
            :...||:||||..:||..:||.|||||::|..|||||:||:...|.|::..|: ||||.||.:::
Zfish   574 VQNALPSYARPVFLRLSPEVDKTGTFKIQKTRLQKEGFDPHQTADRLFFLNSRQGRYESLTEELH 638

  Fly   737 DQVQRNEI 744
            ..:.:.::
Zfish   639 SAIMQGKV 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 282/601 (47%)
hsFATP4_like 199..712 CDD:213305 256/520 (49%)
slc27a1bNP_001070716.1 PRK08279 60..648 CDD:236217 279/596 (47%)
AFD_class_I 103..613 CDD:302604 256/518 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582986
Domainoid 1 1.000 426 1.000 Domainoid score I588
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 576 1.000 Inparanoid score I1005
OMA 1 1.010 - - QHG63225
OrthoDB 1 1.010 - - D298283at2759
OrthoFinder 1 1.000 - - FOG0000388
OrthoInspector 1 1.000 - - mtm6556
orthoMCL 1 0.900 - - OOG6_100576
Panther 1 1.100 - - O PTHR43107
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2110
SonicParanoid 1 1.000 - - X222
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

Return to query results.
Submit another query.