DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp1 and Acsl4

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_997508.1 Gene:Acsl4 / 50790 MGIID:1354713 Length:711 Species:Mus musculus


Alignment Length:621 Identity:135/621 - (21%)
Similarity:232/621 - (37%) Gaps:145/621 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 RW-TFRQVNEHANKVANVLQAQGYKKGDVVALLLENRAEYVATWLGLSKIGVITPLINTNLRGPS 264
            :| .:.:||...|...:.|.|.|.|..:.:|:..|.|||::.......|.......:...|...:
Mouse   124 KWINYLEVNCRVNNFGSGLTALGLKPKNTIAIFCETRAEWMIAAQTCFKYNFPLVTLYATLGREA 188

  Fly   265 LLHSITVAHCSALIYGEDFLE-----AVTDV--AKDLPANLTLFQFNNENNNSETEKNIPQAKNL 322
            ::|.:..:..|.||...:.||     |:.|:  .|.:     ::..|...|.:|    .|:...:
Mouse   189 VVHGLNESEASYLITSVELLESKLKAALVDINCVKHI-----IYVDNKTINRAE----YPEGLEI 244

  Fly   323 NALLTTASY-EKPNKTQV-----NHHDKLVYIYTSGTTGLPKAAVISHSRYLFIAAGI----HYT 377
            :::.:.... .||....|     ...|..:.:||||:||.||..::.||.   :.||:    ...
Mouse   245 HSMQSVEELGAKPENLSVPPSRPTPSDMAIVMYTSGSTGRPKGVMMHHSN---LIAGMTGQCERI 306

  Fly   378 MGFQEEDIFYTPLPLYHT---AGGIMCM--GQSVLFGSTVSIR------KKFSASNYFADCAKYN 431
            .|...:|.:...|||.|.   ...|.|.  |..:.:.|.:::.      ||.|.    .||....
Mouse   307 PGLGPKDTYIGYLPLAHVLELTAEISCFTYGCRIGYSSPLTLSDQSSKIKKGSK----GDCTVLK 367

  Fly   432 ATIGQYIGEMARYI---LATKPSE------------YDQK------------------HRVRLVF 463
            .|:...:.|:...|   :.:|..|            ||.|                  .:|:.:.
Mouse   368 PTLMAAVPEIMDRIYKNVMSKVQEMNYVQKTLFKIGYDYKLEQIKKGYDAPLCNLILFKKVKALL 432

  Fly   464 GNGLR------PQIWPQFVQRFNI---AKVGEFYGATE--GNANIMN-HDNTVGAIGFVSRILPK 516
            |..:|      ..:.||..:..|:   ..:|:.||.||  |...:.. .|.|.|.:|     .|.
Mouse   433 GGNVRMMLSGGAPLSPQTHRFMNVCFCCPIGQGYGLTESCGAGTVTEVTDYTTGRVG-----APL 492

  Fly   517 IYPISIIRADPDTGEPIRDRNGLCQLCAPNEPGVFIGKIVKGNPSREFLGYVDEKASAKKIVKDV 581
            |.....::...:.|..:.|:        ||..    |:||.|..:.....:.:|:.:|:....| 
Mouse   493 ICCEIKLKDWQEGGYTVHDK--------PNPR----GEIVIGGQNISMGYFKNEEKTAEDYCVD- 544

  Fly   582 FKHGDMAFISGDLLVADEKGYLYFKDRTGDTFRWK-GENVSTSEVEAQVSN---------VAGYK 636
             ::|...|.:||:......|.|...||..|..:.: ||.||..:|||.:.|         .|...
Mouse   545 -ENGQRWFCTGDIGEFHPDGCLQIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLIDNICAFAKSD 608

  Fly   637 DTVVYGVTIPH------------TEGRAGMAAIYDPERELDL--DVFAASLAKVLPAYARPQIIR 687
            .:.|....:|:            .|| :.:....:|..|.::  ::..|:.|..|..:..|..:|
Mouse   609 QSYVISFVVPNQKKLTLLAQQKGVEG-SWVDICNNPAMEAEILKEIREAANAMKLERFEIPIKVR 672

  Fly   688 LLTKV------DLTGTFKLRKVDLQKEGYDPNAIKD 717
            |..:.      .:|..|||::.:| |..|    :||
Mouse   673 LSPEPWTPETGLVTDAFKLKRKEL-KNHY----LKD 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 135/621 (22%)
hsFATP4_like 199..712 CDD:213305 133/614 (22%)
Acsl4NP_997508.1 LC_FACS_euk1 121..696 CDD:341294 130/607 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839023
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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