DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp1 and bgm

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster


Alignment Length:662 Identity:130/662 - (19%)
Similarity:243/662 - (36%) Gaps:142/662 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 TVADVFERNVQAHPDKVAVVSETQR-----WTFRQVNEHANKVANVLQAQGYKKGDVVALLLENR 236
            :|..:.:|.|..:.|..|:.::..:     .|::|..:..::||......|.::...|.:|..|.
  Fly    47 SVPGLLKRTVNNYGDYPALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLGLEEHHSVGVLAFNC 111

  Fly   237 AEYVATWLG-LSKIGVITPLINTNLRGPSLLHSITVAHCSALIYGE----DFLEAVTDVAKDLPA 296
            ||:..:.:| :...|:|..:..|| ...::.|.:..:|...::..:    |.:.|:.|....|.|
  Fly   112 AEWFYSAMGAIHARGIIAGIYTTN-SADAVQHVLESSHAQIVVVDDAKQMDKIHAIRDKLPKLKA 175

  Fly   297 NLTLFQFNNENNNSETEKNIPQAKNLNALLTTASYEKPNKTQVNH-----------HDKLVYIYT 350
            .:.:           .|...|..|..:.....:..|..|.:.|..           ::....:||
  Fly   176 AIQI-----------QEPYSPYLKKEDGYYRWSEIESMNVSDVEDQYMTRLENVAINECCCLVYT 229

  Fly   351 SGTTGLPKAAVISHSRYLFIAAGIHYTMG----FQEEDIFYTPLPLYHTAGGIMCMGQSVLFGST 411
            |||.|:||..::||....|...||...|.    ..|..:.|  |||.|.|            ..|
  Fly   230 SGTVGMPKGVMLSHDNITFDVRGIVKAMDRVVVGAESIVSY--LPLSHVA------------AQT 280

  Fly   412 VSIRK-KFSAS-NYFADCAKYNATIGQYIGEM--ARYILATKPSEYDQKHRVRLVFGNGLRPQIW 472
            |.|.. .|.|. .:|||......|:.:.:.:.  .|::...:..|..|:..|.:...:|...::.
  Fly   281 VDIYTCAFVAGCIWFADKDALKGTLVKSLQDARPTRFMGVPRVYEKFQERMVAVASSSGSLKKML 345

  Fly   473 PQFVQRFNIAKVGEFYGATEGN-----ANIMNHDNTVGAIGF--VSRILPKIYPISIIRADPDTG 530
            ..:.:...:.......|.:.|.     |..:.......|:||  |..:.....|:|     |:|.
  Fly   346 ASWAKGITLKHYMVSQGKSSGGFRYKIAKSLIMSKVKQALGFDRVLTLASAAAPMS-----PETK 405

  Fly   531 E-------PIRDRNGLCQ------LCAPNEPGV-FIGKIVKGNPSR------------------E 563
            :       .|.|..|:.:      :|.|:..|: .|||.:.|..|:                  .
  Fly   406 KYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLPGCESKFINKDANGHGELCIRGRHV 470

  Fly   564 FLGYVDEKASAKKIVKDVFKHGDMAFISGDLLVADEKGYLYFKDRTGD-TFRWKGENVSTSEVEA 627
            |:||:|.|...::.:.|     |....||||...|:|||:....|:.: .....|||:....:|.
  Fly   471 FMGYIDNKEKTEESLDD-----DCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENIPPVHIEN 530

  Fly   628 QV-SNVAGYKDTVVYGVTIPHTEGRAGMAAIYDPERELDLD-------------VFAASL----- 673
            .: ..:....:..:.|      |.|..:..:...:.|:|.|             |:..||     
  Fly   531 TIKKELDAISNAFLVG------EQRKYLTVLITLKTEVDKDSGEPLDELSHESSVWVKSLGVEHK 589

  Fly   674 --AKVLPAYARPQI-------IRLLTKVDLTGTFKLRKVDLQKEGYDPNAIKDALYYQTSKGRYE 729
              :.:|.|...|::       |:...|..::...|::|..:....:   :|.......|.|.:..
  Fly   590 TVSDILAAGPCPKVWKSIEDAIKRANKQSISNAQKVQKFTILPHDF---SIPTGELGPTLKVKRN 651

  Fly   730 LLTPQVYDQVQR 741
            :::....|::::
  Fly   652 VVSKMYADEIEK 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 130/662 (20%)
hsFATP4_like 199..712 CDD:213305 121/609 (20%)
bgmNP_001285923.1 FAA1 32..666 CDD:223953 130/662 (20%)
ACSBG_like 69..665 CDD:213299 125/640 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452154
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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