DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp1 and CG11407

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_650831.1 Gene:CG11407 / 42354 FlyBaseID:FBgn0038733 Length:538 Species:Drosophila melanogaster


Alignment Length:512 Identity:110/512 - (21%)
Similarity:208/512 - (40%) Gaps:90/512 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 LWAYIKLLRYTKRHERLNYTVADVFERNVQAHPDKVAVVSETQR--WTFRQVNEHANKVANVLQA 220
            :|:..:|..|...|    .::.::....::.||..:|.:|.|:.  .|..::..:|..:|:.:::
  Fly    15 IWSGDQLEYYFDPH----LSIGEIIFNEMRRHPQLIAQISATENTILTRAELQANAMHIASYMRS 75

  Fly   221 QGYKKGDVVALLLENRAEYVATWLGLSKIGVITPLINTNLRGPSL--LHSIT---VAHCSALIYG 280
            .|..:.|:|.::..|.....|........|:....:|.:....::  |.|||   :..|.    |
  Fly    76 LGLLQMDIVGIIARNTTHISAVAYACFFNGIAFHSLNISYEQSTIEKLFSITRPNIIFCD----G 136

  Fly   281 EDFLEAVTDVAKDLPANLTLFQFNNENNNSETEKNIPQAK-NLNALLTTASYEK---PNKTQVNH 341
            ::| |.|......|...:.            |.:|.|... .::.:|:| ..||   |.:.:..:
  Fly   137 DEF-EKVRSATAQLDVKII------------TMRNHPSGSIRIDQVLST-PIEKNFQPVRLEQGN 187

  Fly   342 HDKLVYIYTSGTTGLPKAAVISHSRYLFIAAGIHYTMGFQEEDIFYTPLPLYHTAGGIMCMGQSV 406
            ...|..:.:|||||:|||..|::||.:     ::.:......|:.|:...|....|.:..:...|
  Fly   188 DQTLAILCSSGTTGIPKAVTITNSRQI-----LNSSHSLTTNDVQYSHSTLDWITGLLTTVTSGV 247

  Fly   407 LFGSTVSIRKKFSASNYFAD------CAKYNAT-IGQYIGEMARYILATKPSEYDQKHRVRLVFG 464
            .  ||    |:..|.|.|..      ..::..| |.|....||..:.:...:..|.......:||
  Fly   248 F--ST----KRIIADNIFDPEFFMRLVEEHQITWIIQAPAHMAMMVNSPSFTTSDLSSLRYYLFG 306

  Fly   465 NGLRPQIWPQFVQRFNIAK--VGEFYGATE-GNANIMN-----HDNTVGAIGFVSRILPKIYPIS 521
             |.|..:..|...|..::|  :...||.|| |:...:|     ..|:||.:  |:.:..|:.   
  Fly   307 -GSRASVETQHRIRSRLSKDCLHFAYGFTELGSMAALNLHFDEKPNSVGRL--VAGLKLKVI--- 365

  Fly   522 IIRADPDTGEPIRDRNGLCQLCAPNEPGVFIGKIVKGNPSREFLGYVDEKASAKKIVKDVFKHGD 586
                 .:.||.:          .|:|    :|::...| .:.:.||........| ::|   |.:
  Fly   366 -----CEKGESL----------GPDE----VGELCLWN-GQYWAGYYGNPEETHK-MRD---HHN 406

  Fly   587 MAFISGDLLVADEKGYLYFKDRTGDTFRWKGENVSTSEVEAQVSNVAGYKDTVVYGV 643
            . |.:|||...|:.|::|..:|..|..:::......:|:|:.:|.:....:..|:||
  Fly   407 W-FHTGDLGYVDDDGFIYIVERKKDMLKFQNIMYYPNEIESVISKMPDVVEVCVFGV 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 110/512 (21%)
hsFATP4_like 199..712 CDD:213305 102/471 (22%)
CG11407NP_650831.1 CaiC 26..523 CDD:223395 107/501 (21%)
Firefly_Luc_like 47..522 CDD:213279 104/476 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452162
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.