DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp1 and CG6300

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_650828.1 Gene:CG6300 / 42351 FlyBaseID:FBgn0038730 Length:537 Species:Drosophila melanogaster


Alignment Length:523 Identity:109/523 - (20%)
Similarity:195/523 - (37%) Gaps:112/523 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 LWAYIKLLRYTKRHERLNYTVADVFERNVQAHPDKVAVVSETQR--WTFRQVNEHANKVANVLQA 220
            :|:...:::|...    :.::.::....::.||...|.:|.|:.  .|..::..:|.::|:.:::
  Fly    15 IWSGEPVVKYFDP----DLSIGEIIFHEMRRHPQLTAQISATEGTVLTRGELLANAMRLASYMRS 75

  Fly   221 QGYKKGDVVALLLENRAEYVATWLGLSKIGVITPLINTNLRGPSLLHSITVAHCSALIYGEDFLE 285
            .|..:.|:|.::..|....:|........|:....:|......::.....|...|.:....|..|
  Fly    76 LGLLQSDIVGIIGRNTTHMLAVAYACFFNGIAFHSLNITYDRDTIEKIYKVTRPSIIFCDGDEFE 140

  Fly   286 AVTDVAKDLPANLTLFQFNNENNNSETEKNIP-QAKNLNALLTTASYE--KPNKTQVNHHDKLVY 347
            .|.....:|...:.            |.:|.| .:..::.::.|...|  :|.|.:..:...|..
  Fly   141 KVRSATAELDVKIV------------TMRNHPLDSIKIDEVVATPIEENFQPAKLEKGNDQTLAI 193

  Fly   348 IYTSGTTGLPKAAVISHSRYLFIAAGIHYTMGFQEEDIFYTPLPLYHTAGGIMCMGQSVLFGSTV 412
            :.:|||||.|||..|::||:: :|...|.|..    |:.|:...|....|.:..:...|      
  Fly   194 LCSSGTTGTPKAVTITNSRHI-LAGNYHLTTA----DVQYSHNTLDWITGLLTTITSGV------ 247

  Fly   413 SIRKKFSASNYFADCA-------------KYNATIGQYIGEMARYILATKPSEYDQKHRVRLVFG 464
                 ||.:...||.|             |...|| |....||..|........|.......:||
  Fly   248 -----FSTTRIIADNAFDPAFALRIIEEYKVTWTI-QPPSSMALMINCPDFETCDMSSLRCYMFG 306

  Fly   465 ---------NGLRPQI---WPQFVQRFNIAKVGEFYGATE--GNANIMNH-DNTVGAIG-FVSRI 513
                     .|:|.::   ..|||           ||.||  ..|.|..| |...|::| .|:.:
  Fly   307 GSRAALEVQKGIRSRLSHDCLQFV-----------YGFTELGAMATINCHFDEKTGSVGQLVNGL 360

  Fly   514 LPKIYPISIIRADPDTGEPI-RDRNGLCQLCAPNEP--GVFIGKIVKGNPSREFLGYVDEKASAK 575
            ..||.        .|.||.: .|..|  ::|..|..  ..:.|..|:....|:.||:        
  Fly   361 KMKII--------NDDGESLGPDEIG--EVCIMNNQHWSGYYGNEVETRNMRDSLGW-------- 407

  Fly   576 KIVKDVFKHGDMAFISGDLLVADEKGYLYFKDRTGDTFRWKGENVSTSEVEAQVSNVAGYKDTVV 640
                         :.||||...|..|:||..||..:..:::......:::|:.:|.:....:..|
  Fly   408 -------------YHSGDLGYMDRDGFLYIMDRKKEMLKYQNIMYYPNDIESVISEMPQVAEVCV 459

  Fly   641 YGV 643
            :|:
  Fly   460 FGI 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 109/523 (21%)
hsFATP4_like 199..712 CDD:213305 103/482 (21%)
CG6300NP_650828.1 CaiC 26..523 CDD:223395 107/512 (21%)
AFD_class_I 47..522 CDD:302604 105/487 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452166
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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