DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp1 and CG3961

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_649067.2 Gene:CG3961 / 40056 FlyBaseID:FBgn0036821 Length:704 Species:Drosophila melanogaster


Alignment Length:757 Identity:154/757 - (20%)
Similarity:267/757 - (35%) Gaps:209/757 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 AVLVALVALLLTKPGWRW-------FYIAGATASRDLTALWAYIKLLRYTKR-HERLNYTV---A 179
            :|:..:..|:::...:.|       :|:.|...:..|.:|.|.:.....|:. .||....:   :
  Fly     6 SVMAYVNHLIVSNFSYFWDEIDGYLYYLGGTLGTLTLGSLAASVAYYFATRPVPERPLVPLENQS 70

  Fly   180 DVFERNVQAHPDK----------VAVVSETQRWTFRQVNEHANKVAN------------------ 216
            .:.|...|.|..|          |:.::|..|..::...|.|....|                  
  Fly    71 PLLEGPEQIHVSKFYKESKNGKFVSYITENVRTLYQTFREGAYASNNGPCLGWRETLTSPYQWIN 135

  Fly   217 ----VLQAQGYKKG---------DVVALLLENRAEYVATWLGLSKIG-VITPLINTNLRGPSLLH 267
                :|:|:.:..|         .::.:..:||.|::....|..... |:.||.:|  .||..  
  Fly   136 YDEALLRAKNFGAGMLALGARPKQLIGIYSQNRPEWILYEQGCYSFSLVVVPLYDT--LGPDA-- 196

  Fly   268 SITVAHCSALIYGEDFLEAVTDVAKDLPANLTLFQFNNENNNSETEKNIPQAKNLNAL----LTT 328
                  |:.:|...|.  .|..|..|..|.:.|            ||.....|.:.|:    .||
  Fly   197 ------CAFIIRQTDM--QVVIVEDDGKAAMLL------------EKAPRSLKIIVAIKPIRQTT 241

  Fly   329 ASYEKPNKTQV-------------NH-------HDKLVYIYTSGTTGLPKAAVISHSRYLFIAAG 373
            ....:....|:             ||       .|.....|||||||.||..:::|...:.....
  Fly   242 LERARSRGIQIFSFIDVEKLGAKGNHPEVPPTAEDLCTVCYTSGTTGNPKGVMLTHGNVVAGVCS 306

  Fly   374 IHYTMG---FQEEDIFYTPLPLYH-----TAGGIMCMGQSVLFGS---------------TV--- 412
            :...||   .:..|:..:.|||.|     ...|:..:|..|.|.|               ||   
  Fly   307 VILQMGDHRIRAGDVMVSFLPLAHMFERCCENGMYYVGGCVGFYSGDIKELTNDLKMLKPTVMPA 371

  Fly   413 ----------SIRKKFSASNYFADCAKYNATIGQYIGEMARYILATKPSEYDQK--HRVRLVFGN 465
                      .|:...|||.  .....:|..:.....|:||.:| .:...:|:.  .:|...||.
  Fly   372 VPRLLNRVYDKIQNDISASG--LKRGLFNMAMRAKEKEIARGVL-RRNGCWDKLVFKKVHQAFGG 433

  Fly   466 GLRPQIWPQFVQRFNI---------AKVGEFYGATEGNANI---MNHDNTVGAIG-FVSRILPKI 517
            .||..:........|:         ..|.|.||.||....|   :..|:....:| .||....|:
  Fly   434 NLRLMVVGSAPLAGNVLTFMRCALGCLVLEGYGQTECTGAITLTVQGDHVPNHVGPPVSCNAVKL 498

  Fly   518 YPISIIR--ADPDTGEPIRDRNGLCQLCAPNEPGVFIGKIVKGNPSREFLGYV-DEKASAKKIVK 579
            ..:..:.  |:.:|||          :|            |:|  |..|.||. |.:.:|:.|..
  Fly   499 VDVPEMEYFANQNTGE----------VC------------VRG--SNVFHGYYKDPEKTAEAIDS 539

  Fly   580 DVFKHGDMAFISGDLLVADEKGYLYFKDRTGDTFRW-KGENVSTSEVEAQVSNVAGYKDTV-VYG 642
            :.:.|      :||:.:....|.|...||....|:. :||.:...::| .:..::.|.:.| |||
  Fly   540 EGWHH------TGDVGMWLPNGTLRIIDRRKHIFKLSQGEYIVPEKIE-NIYTLSQYVNQVYVYG 597

  Fly   643 VTIPHTEGRAGMAAIYDPERELDLDVFAA--SLAKVLPAYARPQIIRLLTKVDLTGTFK---LRK 702
            .::     ::.:.|:..|:.:: |..:|.  ::...|......:.::.|...|:....|   |:.
  Fly   598 ESL-----KSCIIAVVVPDTDV-LKQWATENNVRGTLSVLCNNKNVKELIMNDMLNWGKQSGLKS 656

  Fly   703 VDLQKEGY---DPNAIKDALYYQTSKGRYELL----TPQVYD 737
            .:..|:.|   ||.::::.|...|.|.:...|    .||:.|
  Fly   657 FEQVKDIYLHPDPFSVQNGLLTPTFKAKRPQLKSYFKPQLED 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 149/723 (21%)
hsFATP4_like 199..712 CDD:213305 128/632 (20%)
CG3961NP_649067.2 LC-FACS_euk 130..701 CDD:341250 133/633 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452157
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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