DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp1 and Fatp3

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster


Alignment Length:644 Identity:299/644 - (46%)
Similarity:410/644 - (63%) Gaps:23/644 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 ATVAFGL-----AIACVIYTLHTMGWIFAVLVALVALLLTKPGWRWFYIAGATASRDLTALWAYI 162
            |||.||.     |:|.:     |:|       |:|||||..|  .:.:....||||||.|...::
  Fly    49 ATVIFGAFCWDNALASL-----TLG-------AVVALLLRNP--TFVFALVMTASRDLKAFQRFV 99

  Fly   163 KLLRYTKRHERLNYTVADVFERNVQAHPDKVAVVSETQRWTFRQVNEHANKVANVLQAQGYKKGD 227
            .|..|..|.:|..:|||..|:...:..|.|...|.:.:..:|.:..|.:.|:|.....:|.::||
  Fly   100 ALNIYLLRKDRGGFTVARCFQDQARRRPKKTCFVMDDRHLSFAEALEFSQKIAGYFSDRGLERGD 164

  Fly   228 VVALLLENRAEYVATWLGLSKIGVITPLINTNLRGPSLLHSITVAHCSALIYGEDFLEAVTDV-A 291
            .||||:|.|.||...|||||::||||.|||:||||.||||||.||:..|||.|.:.|:.:..: .
  Fly   165 CVALLMETRLEYPCIWLGLSQLGVITALINSNLRGESLLHSIKVANAKALIVGSELLDVLVSLRE 229

  Fly   292 KDLPANLTLFQFNNENNNSETEKN-IPQAKNL-NALLTTASYEKPNKTQVNH-HDKLVYIYTSGT 353
            |:....:.::|:.::........: :|.|.:| .||.|....|.|:...... ..||:|:|||||
  Fly   230 KEQLDEVPIYQYTDDEVRGVAGHDLLPGAVDLVTALKTQKKLELPSAVCPGEARSKLLYVYTSGT 294

  Fly   354 TGLPKAAVISHSRYLFIAAGIHYTMGFQEEDIFYTPLPLYHTAGGIMCMGQSVLFGSTVSIRKKF 418
            |||||||||::.|:||::||.:|.:....:|:.|.|||||||||||:.:|.::|.||||.:||||
  Fly   295 TGLPKAAVITNLRFLFMSAGSYYMLKMSSDDVVYDPLPLYHTAGGIVGVGNAILNGSTVVLRKKF 359

  Fly   419 SASNYFADCAKYNATIGQYIGEMARYILATKPSEYDQKHRVRLVFGNGLRPQIWPQFVQRFNIAK 483
            ||.|::.||.::|.|:.|||||:.||:|||..|...|||.:||::|||||||||.|||:||.|..
  Fly   360 SARNFWLDCDRHNCTVAQYIGELCRYLLATSYSPDQQKHNLRLMYGNGLRPQIWSQFVRRFGIPH 424

  Fly   484 VGEFYGATEGNANIMNHDNTVGAIGFVSRILPKIYPISIIRADPDTGEPIRDRNGLCQLCAPNEP 548
            :||.|||||||:|::|..|.|||||||......:||:.::|.|..|||.::|..|.|..|.|.:.
  Fly   425 IGEIYGATEGNSNLINITNRVGAIGFVPVYGSSLYPVQVLRCDEYTGELLKDSKGHCIRCQPGQA 489

  Fly   549 GVFIGKIVKGNPSREFLGYVDEKASAKKIVKDVFKHGDMAFISGDLLVADEKGYLYFKDRTGDTF 613
            |:.:||:........|.||.|:.||.:|::::||..||:.|.|||::|.|..||.||||||||||
  Fly   490 GLLVGKVDARRAVSAFHGYADKGASEQKLLRNVFTSGDVFFNSGDMVVRDILGYFYFKDRTGDTF 554

  Fly   614 RWKGENVSTSEVEAQVSNVAGYKDTVVYGVTIPHTEGRAGMAAIYDPERELDLDVFAASLAKVLP 678
            ||:||||:|.||||.::|..|.:|.|||||.|||.||:||||||.||||::|:|..:..|...||
  Fly   555 RWRGENVATQEVEAIITNCVGLEDCVVYGVQIPHVEGKAGMAAIVDPERKVDMDYLSVVLRGSLP 619

  Fly   679 AYARPQIIRLLTKVDLTGTFKLRKVDLQKEGYDPNAIKDALYYQTSKGRYELLTPQVYD 737
            .||||..||||.::..|.||||:|.:|.||.||...:.|.:||....|.|..|:.:.::
  Fly   620 PYARPLFIRLLDEIPRTATFKLKKRELAKEAYDIGQLSDPIYYLNRDGIYRPLSQEQHE 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 280/589 (48%)
hsFATP4_like 199..712 CDD:213305 258/516 (50%)
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 280/589 (48%)
hsFATP4_like 136..653 CDD:213305 258/516 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452151
Domainoid 1 1.000 384 1.000 Domainoid score I429
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 488 1.000 Inparanoid score I781
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D21154at7147
OrthoFinder 1 1.000 - - FOG0000388
OrthoInspector 1 1.000 - - mtm4743
orthoMCL 1 0.900 - - OOG6_100576
Panther 1 1.100 - - P PTHR43107
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2110
SonicParanoid 1 1.000 - - X222
1110.930

Return to query results.
Submit another query.