DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp1 and CG9993

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_611518.1 Gene:CG9993 / 37358 FlyBaseID:FBgn0034553 Length:543 Species:Drosophila melanogaster


Alignment Length:521 Identity:116/521 - (22%)
Similarity:208/521 - (39%) Gaps:101/521 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 LWAYIKLLRYTKRHERLNYTVADVFERNVQAHPDKVAVVSET--QRWTFRQVNEHANKVANVLQA 220
            :|:..|    .|.:...:.|:.:|....::.:.|||..|.:.  :..|..|:.|.:.::|:..|.
  Fly    12 IWSGPK----DKEYYGPDMTLGEVALIILRLYSDKVMQVYDPTGEELTGSQLLEQSRRLAHAFQR 72

  Fly   221 QGYKKGDVVALLLENRAEYVATWLGLSKIGVITPLINTNLRGPSLLHSITVAHCSALIYGEDFLE 285
            ...::||||.:..:|     .|:  |::: ||..|:|.....|  ||....|..:|.::      
  Fly    73 LKLQRGDVVGISAKN-----TTY--LTEV-VIAALLNGTPINP--LHPDFDAETTAYMF------ 121

  Fly   286 AVTDVAK------DLPANLTLFQFNNENNNSETE-----KNIPQAKNLNALLT--TASYEKPNKT 337
               ::.|      ||....||....: :...:||     ..:|..:|:..||.  ...|::....
  Fly   122 ---EITKPKVIFCDLDNYQTLSAVKS-SLKFKTEIILLTGTLPGVRNIQDLLADGCTGYDEKTLF 182

  Fly   338 QVNH---HDKLVYIYTSGTTGLPKAAVISHSRYLFIAAGIHYTMGFQEEDIFYTPLPLYHTAGGI 399
            ...|   .|....|.:||.|||||....|| |.|..:|.|...  |..:.:.:...|||    .|
  Fly   183 ACPHLCGDDTAFIITSSGVTGLPKGVTRSH-RSLLNSAKIPQL--FTSDTVLFCFSPLY----WI 240

  Fly   400 MCMGQSVLFGSTVS------IRKKFSASNYFADCAK-----YNATIGQYIGEMARYILATKPSEY 453
            .|:  ..|..|.|:      ..:.||.: ||||..:     :..|:..::.     :||..|...
  Fly   241 SCI--FTLLASLVNGCRRIITNRPFSVA-YFADLVERHQVSFVLTVPHHMA-----LLAKSPERQ 297

  Fly   454 DQKHRVRLV-----FGNGLRPQIWPQFVQRFNIAKVGEFYGATE-GNANIMNHDNTVGAIGFVSR 512
            :...:::.|     .|:.:...||.|..:.....:....||.|| |..:    .|..|.:|...|
  Fly   298 ELAAKMQCVQSFVCSGSKVPMGIWRQLYELLGANRFAVLYGLTETGGIS----KNVGGPLGSEGR 358

  Fly   513 ILPKIYPISIIRADPDTGEPIRDRNGLCQLCAPNEPGVFIGKIVKGNPSREFLGYVDEKASAKKI 577
            :|..:.    :|        :.|.:|  |...||:.|..:.::     :..:.||.......:..
  Fly   359 LLRNVQ----VR--------VVDPHG--QSLGPNQTGQILVRL-----NLRWGGYYHNPQETQVT 404

  Fly   578 VKDVFKHGDMAFISGDLLVADEKGYLYFKDRTGDTFRWKGENVSTSEVEAQVSNVAGYKDTVVYG 642
            |....|.    .::||....|::|.|:|:.|..|.|::....:...::|..:.::.|..:..|:|
  Fly   405 VTPDGKW----LLTGDHGYFDDEGCLHFQSRDTDVFKYNHFPIYPKQIEDVILHLPGVHEVAVFG 465

  Fly   643 V 643
            :
  Fly   466 I 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 116/521 (22%)
hsFATP4_like 199..712 CDD:213305 107/480 (22%)
CG9993NP_611518.1 CaiC 21..532 CDD:223395 113/508 (22%)
AFD_class_I 45..528 CDD:302604 108/484 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452165
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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