DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp1 and CG17999

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_611517.1 Gene:CG17999 / 37357 FlyBaseID:FBgn0034552 Length:545 Species:Drosophila melanogaster


Alignment Length:645 Identity:130/645 - (20%)
Similarity:229/645 - (35%) Gaps:216/645 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 TVADVFERNVQAHPDKVAVVSET--QRWTFRQVNEHANKVANVLQAQGYKKGDVVALLLENRAEY 239
            |:.:|..|.:|.:.|:|..:.:|  |..|..|:.:.:.::|...:..|.::||||.:...|....
  Fly    28 TLGEVIMRVLQINADQVMQICDTTGQELTGAQLAQQSARIAQAFKRLGLRRGDVVGISANNSTYL 92

  Fly   240 VATWLGLSKIGV-ITPL---------------------------------INTNLRGPSLLHSIT 270
            .:..:.....|: |.||                                 :|..|:.|:.::   
  Fly    93 TSVIIAALLRGIPINPLHPEFTEETVKYMYDITEPKVIFCDVENYHIIKTVNGKLQNPAKIY--- 154

  Fly   271 VAHCSALIYGEDFLEAVTDVAKDLPANLTLFQFNNENNNSETEKNIPQAKNLNALLTTASYEKPN 335
                  |:.|:  ||.|.|:::.|         |:|::                 :|.|:|....
  Fly   155 ------LVNGK--LEGVLDISEML---------NDEDS-----------------ITAAAYVPCP 185

  Fly   336 KTQVNHHDKLVYIY-TSGTTGLPKAAVISHSRYLFIAAGIH-YTMGFQEEDIFYTPLPLYHTAGG 398
            |.   |.|...:|. :|||||:||....||...|......: ||    .:.:..:..|||..:|.
  Fly   186 KL---HGDHTAFIVCSSGTTGMPKGVTRSHRSLLCNCKNPNTYT----RDSVLLSFSPLYWISGT 243

  Fly   399 IMCMGQSVLFGSTVSIRKK-------------------FSASNYFADCAKYNA----------TI 434
            |:.:. |:|.|....|..:                   |.||:..|..:|:::          :|
  Fly   244 IILLA-SLLNGCRRIITNRPYSVEYLLQLVARHKVTFLFLASHQIALLSKHDSDVMELKAQLQSI 307

  Fly   435 GQYIGEMARYILATKPSEYDQKHRVRLVFGNGLRPQIWPQFVQRFNIAKVGEFYGATEGNANIMN 499
            ...||..::...|.....|:       :.||           |||.:.     ||.:|......|
  Fly   308 RVLIGAGSKVCKAVCRRMYE-------LIGN-----------QRFVVG-----YGLSEMGGLSKN 349

  Fly   500 HDNTVGAIGFVS-----RILPKI-YPISIIRADPDTGEPIRDRNGLCQLCAPNEPGVFIGKIVKG 558
            ....||..|.|.     |:|.|: .|:.|                       ||.|:...::   
  Fly   350 VGGPVGCEGKVMRNVELRVLDKLKMPLGI-----------------------NEVGIIYARL--- 388

  Fly   559 NPSREFLGYV-DEKASAKKIVKDVFKHGDMAFISGDLLVADEKGYLYFKDRTGDTFRWKGENVST 622
              ..::.||. :.:|:.:.:..|     .|.|.:||:...|.:||||.:.|..|.|::....:..
  Fly   389 --RFKWAGYYRNPEATRRALSSD-----GMWFRTGDIGYLDSEGYLYIQTRDTDVFKFNNFQIYP 446

  Fly   623 SEVEAQVSNVAGYKDTVVYGVTIPHTEGRAGMAAI--YDPERE-LDLDVFAASLAKVLPAYARPQ 684
            .::|..:..:.|..:..|:|:....:......|.:  ..||.| |..|                 
  Fly   447 EQIEEFILRLPGVSEACVFGIPDAVSTNLTACAVVRTKSPEGERLTAD----------------- 494

  Fly   685 IIRLLTKVDLTGTFKLRKVDLQKEGYDPNAIKDALYYQTSKGRYELLTPQVYDQVQRNEI 744
            .||.:.:..|:|.:.:|               ..:|:..|..:    ||.  |::||.::
  Fly   495 HIRNIVEHHLSGAYHIR---------------GGVYFIDSLPK----TPN--DKLQRRKV 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 130/645 (20%)
hsFATP4_like 199..712 CDD:213305 117/589 (20%)
CG17999NP_611517.1 CaiC 25..545 CDD:223395 130/645 (20%)
AFD_class_I 38..529 CDD:302604 125/629 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452169
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.