DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp1 and CG8834

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_610779.1 Gene:CG8834 / 36356 FlyBaseID:FBgn0033733 Length:535 Species:Drosophila melanogaster


Alignment Length:554 Identity:125/554 - (22%)
Similarity:201/554 - (36%) Gaps:120/554 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 KRHERLNY--TVADVFERNVQAHPDKVAVVSETQ--RWTFRQVNEHANKVANVLQAQGYKKGDVV 229
            ||:...||  :|..:...|::..|..|..:.:..  ..||.|....:.::|..|:.:|....||:
  Fly    19 KRNSIYNYDTSVGKIIFNNMKNWPKNVCQICDVDGVTVTFEQGLTWSIRIAQYLKKRGLNHKDVI 83

  Fly   230 ALLLENRAEYVATWLGLSKIGVITPL--INTNLRGPSLLHSITVAHCSALIY--GEDFLEAVTDV 290
            .:..:| :.||.. ||::.:...||.  :|..|...:|.|..::.. ..||:  |:::.:.....
  Fly    84 GIAAKN-STYVMP-LGVACLMNGTPFHSVNPVLDDATLTHVFSITK-PTLIFCDGQEYDKVHKAT 145

  Fly   291 AKDLPANLTLFQFNNENNNSETEKNIPQAKNLNALL---TTASYEKPNKTQVNHHDKLVYIYTSG 352
            ....|..|||            ..::...:.:..||   ||....:|...:......:..:.:||
  Fly   146 VGWHPEILTL------------TDHVEGVQGIETLLDPTTTEKIYQPEVLKEGGDQTVAILCSSG 198

  Fly   353 TTGLPKAAVISHSRYLFIAAGIHYTMGFQEEDIFYTPLPLYHTAGGIMCMGQSVLFGSTVSIRKK 417
            |||||||..||:|..      |..:|....:.:.|....| ....|:.....|.:||.|..|..|
  Fly   199 TTGLPKAVCISNSIL------IQDSMLITSQSVIYVGSCL-DWITGLWAFVFSTVFGCTRIISNK 256

  Fly   418 FSASNYFADCA-KYNATIGQYIGEMARYI--LATKPSEYDQKHR-----VRLVFGNGLRPQIWPQ 474
            .....||.... ||..   .|.....|::  |.|.|   |.|..     ..|.:|.|   .|...
  Fly   257 AFTPEYFVGLVKKYKI---NYAVLPPRHLSALITCP---DAKPDALAPITHLNYGGG---SISLA 312

  Fly   475 FVQRF-NIAKVGEF---YGATEGNANIMNHDNTVGAIGFVSRILPKIYPISIIRADPDTGEPIRD 535
            .:||. .:.|...|   ||.||..|..:|       || :|.:             ...|.|:  
  Fly   313 TLQRSQELCKTAMFNSGYGMTEVGAITIN-------IG-ISNV-------------SSAGRPV-- 354

  Fly   536 RNGLCQLCAPNEPGVFIGKIVKGNPSREFLGYVDEKASAKKIVKDVFKHGDMA------------ 588
                        ||:.|..:.:...|   |||        ..|.:::.|...|            
  Fly   355 ------------PGIKIRIVDEDGKS---LGY--------NQVGEIYVHTGQAWNGYYGNPVETR 396

  Fly   589 --------FISGDLLVADEKGYLYFKDRTGDTFRWKGENVSTSEVEAQVSNVAGYKDTVVYGVTI 645
                    |.:|||...||:.:||..||..:..::.|.:...:|:|..::.::..:|..|.|:..
  Fly   397 RMQDFEGWFHTGDLGYFDEQNFLYIVDRKKEILKYNGLHYWPTEIETVIAELSQVQDVCVVGIYD 461

  Fly   646 PHTEGRAGMAAIYDPERELDLDVFAASLAKVLPA 679
            ......||...:......:........:||.|||
  Fly   462 EREGDAAGALVVKSKGATISAKEIVEHVAKRLPA 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 125/554 (23%)
hsFATP4_like 199..712 CDD:213305 117/522 (22%)
CG8834NP_610779.1 CaiC 20..529 CDD:223395 124/553 (22%)
AFD_class_I 46..519 CDD:302604 117/527 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452168
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.