DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp1 and Acsbg2

DIOPT Version :10

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_006244373.1 Gene:Acsbg2 / 301120 RGDID:1588580 Length:698 Species:Rattus norvegicus


Alignment Length:709 Identity:156/709 - (22%)
Similarity:269/709 - (37%) Gaps:197/709 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 LWA-------YIKLLRYTKRHERLNYTVADVFERNVQ---AHPDKVAVVSET-QRW---TFRQVN 208
            ||:       .::|.::...|| ...|:.::|:.:|:   |:|   |:.|:. ::|   ||.|..
  Rat    54 LWSTHCDGEVLLRLSKHGPGHE-TPMTIPELFQESVERFGAYP---ALASKNGKKWDTLTFSQYY 114

  Fly   209 EHANKVANVLQAQGYKKGDVVALLLENRAEYVATWLGLSKIGVITPLINTNLRGPSLLHSITVAH 273
            :...|.|..|...|.::...|.:|..|..|:|...||....|.:...|.......:..:.|..|:
  Rat   115 DVCRKAARSLIKLGLQRFHGVGILGFNSVEWVVAALGAILAGGLCVGIYATNSAEACQYVIKQAN 179

  Fly   274 CSALIYGED-FLEAVTDVAKD------------LP-----ANLTLFQFNNENNNSETEKNIPQAK 320
            .:.||...| .|:.:..:..|            ||     .||..:|...|..|:     ||..:
  Rat   180 VNVLIVENDQQLQKILSIPPDKMETVKAIVQYRLPLMENSTNLYSWQDFMELGNA-----IPNIQ 239

  Fly   321 NLNALLTTASYEKPNKTQVNHHDKLVYIYTSGTTGLPKAAVISHSRYLFIAAG-------IHYTM 378
            ....:|:    :|.|:.       .|.||||||||.||..::||....:.|..       ||.: 
  Rat   240 LDRVILS----QKANQC-------AVIIYTSGTTGSPKGVMLSHDNITWTAGAMAREIELIHVS- 292

  Fly   379 GFQEEDIFYTPLPLYHTAGGIM------CMGQSVLFGSTVSIRKKFSAS------NYF------- 424
            |.|:..:.|  |||.|.|..:|      .:|....|....::|.....:      .||       
  Rat   293 GKQDTIVSY--LPLSHIAAQLMDIWIPIKVGVLTFFAQPDALRGTLVYTLQEVKPTYFLGVPRVW 355

  Fly   425 ---ADCAKYNAT---------------IG------QYIGE--------MARYILATKPSE---YD 454
               .|..|.|..               :|      :.:|:        ||:.::.||...   .|
  Rat   356 EKMQDTIKENVAKSSNLRKKAFAWAKMLGLKVNTKKMLGKRDIPMNYRMAKALVFTKVRTSLGLD 420

  Fly   455 QKHRVRLVFGNGLRPQIWPQFVQRFNIA---KVGEFYGATEGNANIMNHDNTVGAIGFVSRILPK 516
            ..|    .|.:|..|  ..|.|..|.::   .:||.||.||     .:..:||.... :.|:|  
  Rat   421 NCH----TFFSGASP--LSQDVSEFFLSLDIPIGEIYGMTE-----CSGPHTVSCKS-IYRVL-- 471

  Fly   517 IYPISIIRADPDTGEPIRDRNGLCQ--LCAPNEPGVFIGKIVKGNPSREFLGYV-DEKASAKKIV 578
                       ..|:.:   || |:  |...|:.||  |::.... ...|:||: .|.|:.:.:.
  Rat   472 -----------SCGKVL---NG-CKNMLYKQNKDGV--GEVCMWG-RHVFMGYLGKEDATLEVLD 518

  Fly   579 KDVFKHGDMAFISGDLLVADEKGYLYFKDRTGDT-FRWKGENVSTSEVEAQV-SNVAGYKDTVVY 641
            :|.:.|      |||:...|...:||...|..:. ....|||:....:|..| ..:......::.
  Rat   519 EDGWLH------SGDIGRLDSHDFLYITGRIKEVLITAGGENIWPIPIETLVKEKIPIISHAMLV 577

  Fly   642 G---------VTIP-HTEGRAGMAAIYDPERELDLDVF---------AASLAKVLP-----AYAR 682
            |         :|:. .|:..:|     :|..:|:|:..         |.:::.:|.     .|..
  Rat   578 GDKAKFLSMLLTLKCETDQMSG-----EPLDKLNLEAISFCQMLGSQAVTVSDILKIRDPVVYTA 637

  Fly   683 PQI-IRLLTKVDLTGTFKLRK-VDLQKEGYDPNAIKDALYYQTSKGRYELLTPQVYDQV 739
            .|. |.::.:..::.:.::|| :.|:|:    .:|:......|||.:.:|:|.:...|:
  Rat   638 IQYGIDIVNQQAVSDSHRIRKWIILEKD----FSIQGGELGPTSKLKRDLITQKYKAQI 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 hsFATP4_like 199..712 CDD:341262 137/629 (22%)
Acsbg2XP_006244373.1 ACSBG_like 100..696 CDD:341256 144/659 (22%)

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