DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp1 and Acsbg2

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_006244373.1 Gene:Acsbg2 / 301120 RGDID:1588580 Length:698 Species:Rattus norvegicus


Alignment Length:709 Identity:156/709 - (22%)
Similarity:269/709 - (37%) Gaps:197/709 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 LWA-------YIKLLRYTKRHERLNYTVADVFERNVQ---AHPDKVAVVSET-QRW---TFRQVN 208
            ||:       .::|.::...|| ...|:.::|:.:|:   |:|   |:.|:. ::|   ||.|..
  Rat    54 LWSTHCDGEVLLRLSKHGPGHE-TPMTIPELFQESVERFGAYP---ALASKNGKKWDTLTFSQYY 114

  Fly   209 EHANKVANVLQAQGYKKGDVVALLLENRAEYVATWLGLSKIGVITPLINTNLRGPSLLHSITVAH 273
            :...|.|..|...|.::...|.:|..|..|:|...||....|.:...|.......:..:.|..|:
  Rat   115 DVCRKAARSLIKLGLQRFHGVGILGFNSVEWVVAALGAILAGGLCVGIYATNSAEACQYVIKQAN 179

  Fly   274 CSALIYGED-FLEAVTDVAKD------------LP-----ANLTLFQFNNENNNSETEKNIPQAK 320
            .:.||...| .|:.:..:..|            ||     .||..:|...|..|:     ||..:
  Rat   180 VNVLIVENDQQLQKILSIPPDKMETVKAIVQYRLPLMENSTNLYSWQDFMELGNA-----IPNIQ 239

  Fly   321 NLNALLTTASYEKPNKTQVNHHDKLVYIYTSGTTGLPKAAVISHSRYLFIAAG-------IHYTM 378
            ....:|:    :|.|:.       .|.||||||||.||..::||....:.|..       ||.: 
  Rat   240 LDRVILS----QKANQC-------AVIIYTSGTTGSPKGVMLSHDNITWTAGAMAREIELIHVS- 292

  Fly   379 GFQEEDIFYTPLPLYHTAGGIM------CMGQSVLFGSTVSIRKKFSAS------NYF------- 424
            |.|:..:.|  |||.|.|..:|      .:|....|....::|.....:      .||       
  Rat   293 GKQDTIVSY--LPLSHIAAQLMDIWIPIKVGVLTFFAQPDALRGTLVYTLQEVKPTYFLGVPRVW 355

  Fly   425 ---ADCAKYNAT---------------IG------QYIGE--------MARYILATKPSE---YD 454
               .|..|.|..               :|      :.:|:        ||:.::.||...   .|
  Rat   356 EKMQDTIKENVAKSSNLRKKAFAWAKMLGLKVNTKKMLGKRDIPMNYRMAKALVFTKVRTSLGLD 420

  Fly   455 QKHRVRLVFGNGLRPQIWPQFVQRFNIA---KVGEFYGATEGNANIMNHDNTVGAIGFVSRILPK 516
            ..|    .|.:|..|  ..|.|..|.::   .:||.||.||     .:..:||.... :.|:|  
  Rat   421 NCH----TFFSGASP--LSQDVSEFFLSLDIPIGEIYGMTE-----CSGPHTVSCKS-IYRVL-- 471

  Fly   517 IYPISIIRADPDTGEPIRDRNGLCQ--LCAPNEPGVFIGKIVKGNPSREFLGYV-DEKASAKKIV 578
                       ..|:.:   || |:  |...|:.||  |::.... ...|:||: .|.|:.:.:.
  Rat   472 -----------SCGKVL---NG-CKNMLYKQNKDGV--GEVCMWG-RHVFMGYLGKEDATLEVLD 518

  Fly   579 KDVFKHGDMAFISGDLLVADEKGYLYFKDRTGDT-FRWKGENVSTSEVEAQV-SNVAGYKDTVVY 641
            :|.:.|      |||:...|...:||...|..:. ....|||:....:|..| ..:......::.
  Rat   519 EDGWLH------SGDIGRLDSHDFLYITGRIKEVLITAGGENIWPIPIETLVKEKIPIISHAMLV 577

  Fly   642 G---------VTIP-HTEGRAGMAAIYDPERELDLDVF---------AASLAKVLP-----AYAR 682
            |         :|:. .|:..:|     :|..:|:|:..         |.:::.:|.     .|..
  Rat   578 GDKAKFLSMLLTLKCETDQMSG-----EPLDKLNLEAISFCQMLGSQAVTVSDILKIRDPVVYTA 637

  Fly   683 PQI-IRLLTKVDLTGTFKLRK-VDLQKEGYDPNAIKDALYYQTSKGRYELLTPQVYDQV 739
            .|. |.::.:..::.:.::|| :.|:|:    .:|:......|||.:.:|:|.:...|:
  Rat   638 IQYGIDIVNQQAVSDSHRIRKWIILEKD----FSIQGGELGPTSKLKRDLITQKYKAQI 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 156/709 (22%)
hsFATP4_like 199..712 CDD:213305 137/629 (22%)
Acsbg2XP_006244373.1 FAA1 78..698 CDD:223953 151/684 (22%)
AFD_class_I 100..696 CDD:302604 144/659 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342888
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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