DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fatp1 and C25G6.3

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_508231.2 Gene:C25G6.3 / 182919 WormBaseID:WBGene00016108 Length:578 Species:Caenorhabditis elegans


Alignment Length:537 Identity:111/537 - (20%)
Similarity:194/537 - (36%) Gaps:165/537 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 FERNVQAHPDKVAV---VSETQRWTFRQVNEHANKVANVLQAQGYKKGDVVALLLENRAEYVATW 243
            :.||.  :|.|:|:   :||.:..|:.::.:.:.:.||.:...|.|.||.:.:.:||..|||...
 Worm    94 YHRNY--NPAKIALIEEISEVRCVTYEELVDGSKRTANYMSHHGVKNGDRILMCMENTVEYVLYQ 156

  Fly   244 LGLSKIGVITPLINTNLRGPSLLHS--ITVAHCSALI-----YGE---------DFLEAVTDVAK 292
            ||...:|.|..|||     ||.:.|  ::...|:..|     ||.         ..:|.|..:|:
 Worm   157 LGGFLLGAIPVLIN-----PSHIASEKLSDIGCTTAIVDFEHYGHMLRISQSTLQSIERVFVLAE 216

  Fly   293 DL--------------------PANLTLFQFNNENNNS---------ETEKNIPQAKNLNALLTT 328
            |:                    |.|....||..|:|:|         |.::.|..::.....|..
 Worm   217 DIAAISLARHVWVIDAFGFLGFPPNYVCDQFIEESNDSVAFIIPGSLENDQYISHSQESGFHLCH 281

  Fly   329 ASYEK----PNKTQ----VNH--------HDKLVYIYTSGTTGLPKAAVISHSRYLFIAAGIHYT 377
            ..:|:    ..||:    .||        ||.|.|:||..|.|  ::.:::.|           |
 Worm   282 DYFEQLFGMLKKTEQLGSKNHLITDGLHCHDALSYLYTILTKG--ESCILAES-----------T 333

  Fly   378 MGFQEEDIFYTPLPLYHTAGGIMCMGQSVLFGST--------VSIRKKFSASNYFADCAKYNATI 434
            |     |::...| |...||.|.....::||.::        ..:.|.::.|: ....|.:.|.:
 Worm   334 M-----DVWRASL-LDRIAGIIEQYKVTLLFSNSQLLKCFIKYEVHKIYNLSS-LEIVANHGAVV 391

  Fly   435 GQYIGEMARYIL-ATKPSEYDQKHRVRLVFGNGLRPQIWPQFVQRFNIAKVGEFYGATEGNANIM 498
            .....:..:.|| .|....|.                     ...|.:|..|:|....:  ..::
 Worm   392 SVATAKKVKKILDVTLIQAYS---------------------AAEFGVASFGDFDETLD--KQLV 433

  Fly   499 NHDNTVGAIGFVSRILPKIYPISIIRADPDTGEPIRDRNGLCQLCAPNEPGVFIGK----IVKGN 559
            |..:::..:        ||..|:.:..|.:..:                     ||    |:.|.
 Worm   434 NCGHSIDDV--------KIKVIAHMETDKEMAK---------------------GKWGQVILSGR 469

  Fly   560 P-SREFLGYVDEKASAKKIVKDVFKHGDMAFISGDLLVADEKGYLYFKDRTGDTFRWKGENVSTS 623
            . .:|::|. .|..:::|..|..||.||...|       ||...::.:....|....:.:.||:.
 Worm   470 QLLKEYIGN-KELNTSRKFGKSWFKTGDYGMI-------DENDRVHIEGAISDLITAQNKLVSSE 526

  Fly   624 EVEAQVSNVAGYKDTVV 640
            .:|:.:.......|.||
 Worm   527 MMESIICEHKMVHDVVV 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 111/537 (21%)
hsFATP4_like 199..712 CDD:213305 104/517 (20%)
C25G6.3NP_508231.2 AMP-binding 99..516 CDD:278902 103/501 (21%)
AFD_class_I 115..543 CDD:302604 102/512 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160523
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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