DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fatp1 and Acsl6

DIOPT Version :9

Sequence 1:NP_001162940.3 Gene:Fatp1 / 26067068 FlyBaseID:FBgn0267828 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_006246283.2 Gene:Acsl6 / 117243 RGDID:69403 Length:722 Species:Rattus norvegicus


Alignment Length:710 Identity:142/710 - (20%)
Similarity:241/710 - (33%) Gaps:259/710 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 TVADVFERNVQAHPDKVAV----VSETQRW-TFRQVNEHANKVANVLQAQGYKKG--DVVALLLE 234
            |:..||.|.:....:...:    ..:..:| ::::|.:.|..:.:.|.....|.|  ..:.:..:
  Rat   116 TMYQVFRRGLSISGNGPCLGFRKPEQPYQWLSYQEVAKRAEFLGSGLLQHDCKVGTEQFIGVFAQ 180

  Fly   235 NRAEYVATWLGLSKIG-VITPLINTNLRGP-SLLHSITVAHCSALIYGED-----FLEAVTDVAK 292
            ||.|::...|...... |:.||.:|  .|| |:.:.|..|....:|..:.     .||.|.  .|
  Rat   181 NRPEWIIAELACYTYSMVVVPLYDT--LGPGSIRYIINTADICTVIVDKPHKAILLLEHVE--RK 241

  Fly   293 DLPA-NLTLFQFNNENNNSETEKNI-PQAKNLNALLTTASYEKPNKTQVNHH--------DKLVY 347
            :.|. .|.:.....::...|..|.. ...|::.|:        .:..|.||.        |..:.
  Rat   242 ETPGLKLVILMEPFDDALRERGKKCGVDIKSMQAI--------EDSGQENHRVPVPPRPDDLSIV 298

  Fly   348 IYTSGTTGLPKAAVISH-------SRYLFIAAGIHYTMGFQEEDIFYTPLPLYHTAGGIMCMGQS 405
            .:||||||.||.|:::|       |.:|.:...:.:.   :::|:..:.|||.|....::   ||
  Rat   299 CFTSGTTGNPKGAMLTHGNVVADFSGFLKVTEKVIFP---RQDDVLISFLPLAHMFERVI---QS 357

  Fly   406 VLFGSTVSIRKKFSASNYFADCAKYNATIGQYIGEMARYILATKPSEYDQKHRVRLVFGN--GLR 468
            |::                  |  :...:|.:.|:                  :||:..:  .||
  Rat   358 VVY------------------C--HGGRVGFFQGD------------------IRLLSDDMKALR 384

  Fly   469 PQIWPQFVQRFNIAKVGEFYGA-----------------TEGNANIMNHD--------NTVGAI- 507
            |.|:|...:..|......|:.|                 .|..:.|:.::        |.:.|. 
  Rat   385 PTIFPVVPRLLNRMYDKIFHQADTSLKRWLLEFAAKRKQAEVRSGIIRNNSIWDELFFNKIQASL 449

  Fly   508 -GFVSRILPKIYPISIIRADPDTGEPIRDRNGLCQL------------CAPNEPGVFIGKIVKGN 559
             |.|..|:....|     |.|.....:|...| ||:            |....||.:....| |.
  Rat   450 GGHVRMIVTGAAP-----ASPTVLGFLRAALG-CQVYEGYGQTECTAGCTFTTPGDWTSGHV-GA 507

  Fly   560 P---------SREFLGYVDEKASAKKIVKDVFKHGDMAFISGDLLVADEKGYLYFKDR------- 608
            |         ..|.|.|...|...:..||     |...|          ||||..:||       
  Rat   508 PLPCNHIKLVDAEELNYWTSKGEGEICVK-----GPNVF----------KGYLKDEDRTKEALDS 557

  Fly   609 -----TGDTFRW-------------------KGENVSTSEVE------AQVSNVAGYKDTV---V 640
                 |||..:|                   :||.|:..::|      ..|:.:..:.|::   :
  Rat   558 DGWLHTGDIGKWLPEGTLKIIDRKKHIFKLAQGEYVAPEKIENIYIRSEPVAQIYVHGDSLKAFL 622

  Fly   641 YGVTIPHTEGRAGMAAIYDPERELDLDVFAASLAKVLPAYARPQIIRLLTKVDLTGTF------- 698
            .|:.:|            |||              |:|.:|:        |..:.|.:       
  Rat   623 VGIVVP------------DPE--------------VMPCWAQ--------KKGIEGNYQELCKSK 653

  Fly   699 KLRK------VDLQKEG--YDPNAIKDALY-----YQTSKGRYELLTPQVYDQVQRNEIR 745
            :|:|      |.|.||.  :....:| |:|     :....|   ||||.:  :.:|.|:|
  Rat   654 ELKKAILDDMVMLGKESGLHSFEQVK-AIYIHCDMFSVQNG---LLTPTL--KAKRPELR 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fatp1NP_001162940.3 PRK08279 153..746 CDD:236217 142/710 (20%)
hsFATP4_like 199..712 CDD:213305 127/644 (20%)
Acsl6XP_006246283.2 LC-FACS_euk 141..719 CDD:341250 138/685 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342898
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.