DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tmc and Tmc7

DIOPT Version :9

Sequence 1:NP_001303362.1 Gene:Tmc / 26067066 FlyBaseID:FBgn0267796 Length:2036 Species:Drosophila melanogaster
Sequence 2:NP_766064.2 Gene:Tmc7 / 209760 MGIID:2443317 Length:726 Species:Mus musculus


Alignment Length:1341 Identity:203/1341 - (15%)
Similarity:355/1341 - (26%) Gaps:689/1341 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 GYRGKRGSRSSRRA--------------SSPMDHVLD-----SVERRRSSVYTTSSEEGTNQEST 242
            |..|..|..|||:.              |.|::.:.:     ||.|||:::.:...:.||..:.|
Mouse     4 GSAGDPGHGSSRQRAVHPENLSLGSSCFSPPVNFLQELPSYRSVARRRTNILSRDKQSGTLLKPT 68

  Fly   243 QE-------QIFENIRLHKEVIQSVKLQPWPIRKKLKLVRQAKTYVARHEGALQERFAMSRSTRD 300
            ..       .|.||:.     .||::.....|.:|.:|            ..:||......|..|
Mouse    69 DSFSCQLDGGITENLN-----SQSIRKYALNISEKRRL------------RDIQETQMKYLSEWD 116

  Fly   301 LWARFKILMAARWRHWKRETASFLTVLIPWELRIKEIESHFGSGVASYFTFLRWLMWVNIMIAIP 365
            .|.|:.   :..|:.:..:.....|.|..|...|:.||..||:|:.|||:|||:|:.:|::|.:.
Mouse   117 QWKRYS---SKSWKRFLEKAREMTTHLELWRKDIRSIEGKFGTGIQSYFSFLRFLVVLNLVIFLI 178

  Fly   366 LVAFVIGPEYFATKHGETD------PRKRMSDPEARV----AGNLFTFWEF-------EGYLKYS 413
            :...|:.| ...||:..|:      |.|.| |.:..:    :..|..|:.:       .|:|:.:
Mouse   179 IFMLVLLP-ILLTKYKITNSTFVLIPFKDM-DIQCTLYPISSSGLIYFYSYIIDLLSGTGFLEET 241

  Fly   414 PMFYGYYSSTSGISTSG--YKLPLAYFLTAVLVYIYSFVATLRKMAENSRNSKLSSKDDECVFSW 476
            .:|||:| :..|:....  |.|||||.::.:.....|.:..:::..|..:.:.:.|::....:..
Mouse   242 SLFYGHY-TIDGVKFQSFTYDLPLAYLISTIAYLALSLLWIVKRSVEGFKINLIRSEEHFQSYCN 305

  Fly   477 KLFTGWDFMIGHAETAHNRIASVVVGFKEALLEEAEKKK-----DNRNWRVILQRILVNILVMGL 536
            |:|.||||.|.:...|..:.:|:....:..|.||..::|     .....|:...|:.:|.:|:.:
Mouse   306 KIFAGWDFCITNRSMAELKHSSLRYELRADLEEERIRQKIAERTSEETIRIYTLRLFLNCIVLAV 370

  Fly   537 LGLSGATVVLLVNHSEDLAKH--------DNWLSRNAVNVTMTLLSFFLPMIFEALGLFENWHPR 593
            |......:.|....|::..|.        :|.|.....::.:||.:|..|:||..:..:|::.|.
Mouse   371 LAACFYAIYLATAFSQEHMKKEIDKMVFGENLLILYLPSIVITLANFITPIIFAKIIHYEDYSPG 435

  Fly   594 QQLRLQLARIMILNMLNLYSLMFSFIYKINSKEKPLQMLKLENETNTMELKNLLSSIEALRAMTP 658
            .::||.:.|.:.:.:..:..|:|:...||.|                                  
Mouse   436 FEIRLTILRCVFMRLATICVLVFTLGSKITS---------------------------------- 466

  Fly   659 TTSLYGESTSDGLFDDSTSTATWGEDGGGLFSTTAAAALISTTVQRLKCYNMTVKCSKLRRNIIS 723
                .|:||.:                                   |..||.             
Mouse   467 ----CGDSTCE-----------------------------------LCGYNQ------------- 479

  Fly   724 GKHLATTLMVLNLTTPAMVPPTLPTTLPTTFPTTLPTTLPTTLPTALPTTLPTTLPTTLPSTLAT 788
                                                                             
Mouse   480 ----------------------------------------------------------------- 479

  Fly   789 TTATTSSIWSTTEETSPTTTTTSPWTTLPPSTTTTEATTTTERATTTTEATSTTTLKITTAEINS 853
                                                                             
Mouse   480 ----------------------------------------------------------------- 479

  Fly   854 TLSDTTKPLGKSIDTEIPNSTTNSATLSTIPATLNTTNLPLNSTTKLTTTTSTEKPQGEDNFIYT 918
                                                                             
Mouse   480 ----------------------------------------------------------------- 479

  Fly   919 TGEDEGSYDYGSDSTSDAPDNNSYSDITDYSSEPSEIEDFDEQESTDQADDPLAKVLEQLDENET 983
                                                                             
Mouse   480 ----------------------------------------------------------------- 479

  Fly   984 KGRRKRALAESPFFTSKYSRRHRNESAVSAGQPRETTESVNATPSRWPFNWASFRQTTPRTTTTR 1048
                                                                             
Mouse   480 ----------------------------------------------------------------- 479

  Fly  1049 RVPSGILTKEEWERLRRLRGRITTTTSTSTTSTTTRRPRWRYRTTTTELTSTTEEESSTTESSTD 1113
                                                                             
Mouse   480 ----------------------------------------------------------------- 479

  Fly  1114 SSSPGSTTNAFDSSSSTTEEDEYTTTEGSENRPYYVGYVDISEMGSTIYYDGDSEFLEECVITIC 1178
                                                                             
Mouse   480 ----------------------------------------------------------------- 479

  Fly  1179 PKGDDFFGSTTESPDSTTQSSDSKQLTTVKLTPLERKQKRLKEVQLAIKQIQTNLTTMCWETSLG 1243
                                         ||.|                         ||||.:|
Mouse   480 -----------------------------KLYP-------------------------CWETQVG 490

  Fly  1244 QELSKVIVFDGLMSIVAPLCIDFLRALFVRYVNQN---WCWDMEKTFPQYGDFKIAENILTLINN 1305
            ||:.|:::||.::.:...|.:||.|.|.|.|...:   .||..:       :|.|.:|:|.::..
Mouse   491 QEMYKLMIFDFIIILAVTLFVDFPRKLLVTYCASSKLIQCWGQQ-------EFAIPDNVLGIVYG 548

  Fly  1306 QGQVWMGIFFSPGLVLINLVKLMIMMYFRSWIVL-TCNVPHEVVFKASKSNNFYLSLLLTMLFLC 1369
            |...|:|.||||.|..|..:|.:|:.|.:...:| ||. |....|:||.||.|:|.:||..|.|.
Mouse   549 QTICWIGAFFSPLLPAIATLKFVIIFYVKELSLLYTCR-PSPRQFRASNSNFFFLLVLLIGLCLA 612

  Fly  1370 VLPVGYAIVWLRPSWHCGPFSEYNRIAEFITNTTRNALPKQLHEPLDYLTSSSTVIPLLLLLILI 1434
            ::|:..::..:..|..||||:.:|...|.|..|. :..|..|...:..:||.:..:|..:::.|:
Mouse   613 IIPLTISMARIPSSKACGPFTNFNTTWEVIPQTV-STFPSSLQTLIHAVTSEAFAVPFFMIICLV 676

  Fly  1435 IYYLVSLTGALREANQDLRTQLQKEREEERKKIFKVPEVKQ 1475
            ::|.::|.||.::....||.||..|..::|..|.|:.|.::
Mouse   677 MFYFIALAGAHKQVVVQLREQLSLESRDKRYLIQKLTEAQR 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TmcNP_001303362.1 TMC 1242..1348 CDD:285101 35/109 (32%)
DUF612 <1447..1844 CDD:282585 9/29 (31%)
Tmc7NP_766064.2 TMC 489..590 CDD:285101 35/108 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.