DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tmc and TMC1

DIOPT Version :9

Sequence 1:NP_001303362.1 Gene:Tmc / 26067066 FlyBaseID:FBgn0267796 Length:2036 Species:Drosophila melanogaster
Sequence 2:XP_016869745.1 Gene:TMC1 / 117531 HGNCID:16513 Length:761 Species:Homo sapiens


Alignment Length:1320 Identity:282/1320 - (21%)
Similarity:427/1320 - (32%) Gaps:590/1320 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 DEDGGGGDIDDEESYTISVSAIMQRRASVRGYRGKRGSRSSRRASSPMDHVLDSVERR-RSSVYT 230
            ||.......::||     |...:.||.|:|..| || :|.......|.....|...|: |.....
Human    16 DETEESSSEEEEE-----VEDKLPRRESLRPKR-KR-TRDVINEDDPEPEPEDEETRKAREKERR 73

  Fly   231 TSSEEGTNQESTQEQIFENIRLH----KEVIQSVKLQPWPIRKKLKLVRQAKTYVARHEGALQER 291
            ...:.|..:|...|:..|.::..    :::|.:||.:||.:.||::::::||.:|:.:||||   
Human    74 RRLKRGAEEEEIDEEELERLKAELDEKRQIIATVKCKPWKMEKKIEVLKEAKKFVSENEGAL--- 135

  Fly   292 FAMSRSTRDLWARFKILMAARWRHWKRETASFLTVLIPWELRIKEIESHFGSGVASYFTFLRWLM 356
               .:.....|..||::||.:|..:.|:..:|....:|||.:||.|||.|||.|||||.||||:.
Human   136 ---GKGKGKRWFAFKMMMAKKWAKFLRDFENFKAACVPWENKIKAIESQFGSSVASYFLFLRWMY 197

  Fly   357 WVNIMIAIPLVAFVIGPEY-FATKHGETDPRKRMSDPEARVAGNLFTFWEFEGYLKYSPMFYGYY 420
            .||:::.|...:.::.||| :...:|.. |||.:...|...|.|....::|.|..:||.:|||||
Human   198 GVNMVLFILTFSLIMLPEYLWGLPYGSL-PRKTVPRAEEASAANFGVLYDFNGLAQYSVLFYGYY 261

  Fly   421 SSTSGISTSGYKLPLAYFLTAVLVYIYSFVATLRKMAENSRNSKLSSKDDECVFSWKLFTGWDFM 485
            .:...|....::|||:|||..::...|||:..|:.|.:|..:.. ...|:...||||:||.||::
Human   262 DNKRTIGWMNFRLPLSYFLVGIMCIGYSFLVVLKAMTKNIGDDG-GGDDNTFNFSWKVFTSWDYL 325

  Fly   486 IGHAETAHNRIASVVVGFKEALLEEAEKKKDNRNWRVILQRILVNILVMGLLGLSGATVVLLVNH 550
            ||:.|||.|:..|:.:.||||:.||...:.:.....:...|.|.|..|...||.||..:...|..
Human   326 IGNPETADNKFNSITMNFKEAITEEKAAQVEENVHLIRFLRFLANFFVFLTLGGSGYLIFWAVKR 390

  Fly   551 SEDLAKHD----NWLSRNAVNVTMTLLSFFLPMIFEALGLFENWHPRQQLRLQLARIMILNMLNL 611
            |::.|:.|    .|..:|.:|:.|:||..|.|.:|:.....|::||...|:..|.||..|.:.||
Human   391 SQEFAQQDPDTLGWWEKNEMNMVMSLLGMFCPTLFDLFAELEDYHPLIALKWLLGRIFALLLGNL 455

  Fly   612 YSLMFSFIYKINSKEKPLQMLKLENETNTMELKNLLSSIEALRAMTPTTSLYGESTSDGLFDDST 676
            |..:.:.:.:||:        |:|.|                                       
Human   456 YVFILALMDEINN--------KIEEE--------------------------------------- 473

  Fly   677 STATWGEDGGGLFSTTAAAALISTTVQRLKCYNMTVKCSKLRRNIISGKHLATTLMVLNLTTPAM 741
                                                                 .|:..|:|    
Human   474 -----------------------------------------------------KLVKANIT---- 481

  Fly   742 VPPTLPTTLPTTFPTTLPTTLPTTLPTALPTTLPTTLPTTLPSTLATTTATTSSIWSTTEETSPT 806
                                                                  :|         
Human   482 ------------------------------------------------------LW--------- 483

  Fly   807 TTTTSPWTTLPPSTTTTEATTTTERATTTTEATSTTTLKITTAEINSTLSDTTKPLGKSIDTEIP 871
                                                                             
Human   484 ----------------------------------------------------------------- 483

  Fly   872 NSTTNSATLSTIPATLNTTNLPLNSTTKLTTTTSTEKPQGEDNFIYTTGEDEGSYDYGSDSTSDA 936
                                                    |.|.|                    
Human   484 ----------------------------------------EANMI-------------------- 488

  Fly   937 PDNNSYSDITDYSSEPSEIEDFDEQESTDQADDPLAKVLEQLDENETKGRRKRALAESPFFTSKY 1001
                                                                             
Human   489 ----------------------------------------------------------------- 488

  Fly  1002 SRRHRNESAVSAGQPRETTESVNATPSRWPFNWASFRQTTPRTTTTRRVPSGILTKEEWERLRRL 1066
                                                                             
Human   489 ----------------------------------------------------------------- 488

  Fly  1067 RGRITTTTSTSTTSTTTRRPRWRYRTTTTELTSTTEEESSTTESSTDSSSPGSTTNAFDSSSSTT 1131
                                                                   .|:::|.|  
Human   489 -------------------------------------------------------KAYNASFS-- 496

  Fly  1132 EEDEYTTTEGSENRPYYVGYVDISEMGSTIYYDGDSEFLEECVITICPKGDDFFGSTTESPDSTT 1196
                    |.|...|::|...|:                        |:|.              
Human   497 --------ENSTGPPFFVHPADV------------------------PRGP-------------- 515

  Fly  1197 QSSDSKQLTTVKLTPLERKQKRLKEVQLAIKQIQTNLTTMCWETSLGQELSKVIVFDGLMSIVAP 1261
                                                    ||||.:|||..::.|.|.|.:.|..
Human   516 ----------------------------------------CWETMVGQEFVRLTVSDVLTTYVTI 540

  Fly  1262 LCIDFLRALFVRYVNQNWCWDMEKTFPQYGDFKIAENILTLINNQGQVWMGIFFSPGLVLINLVK 1326
            |..|||||.|||:.|..||||:|..:|.|.:|.|:.|:|.||.|||.:|||.||:|.|..||:::
Human   541 LIGDFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGINILR 605

  Fly  1327 LMIMMYFRSWIVLTCNVPHEVVFKASKSNNFYLSLLLTMLFLCVLPVGYAIVWLRPSWHCGPFSE 1391
            |...|||:.|.|:.||||...|||||:||||||.:||.:|||..:||.|.||.|.||:.|||||.
Human   606 LHTSMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPPSFDCGPFSG 670

  Fly  1392 YNRIAEFITNTTRNALPKQLHEPLDYLTSSSTVIPLLLLLILIIYYLVSLTGALREANQDLRTQL 1456
            .||:.|.|..|..:..|..:.:.|..|::...||.::|:::|.||||.:.....:.||.||:.::
Human   671 KNRMFEVIGETLEHDFPSWMAKILRQLSNPGLVIAVILVMVLAIYYLNATAKGQKAANLDLKKKM 735

  Fly  1457 QKEREEERKKIFKVPEVKQA 1476
            :.:..|.:.:..|:...:.|
Human   736 KMQALENKMRNKKMAAARAA 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TmcNP_001303362.1 TMC 1242..1348 CDD:285101 52/105 (50%)
DUF612 <1447..1844 CDD:282585 7/30 (23%)
TMC1XP_016869745.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159125
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000928
OrthoInspector 1 1.000 - - otm41193
orthoMCL 1 0.900 - - OOG6_104383
Panther 1 1.100 - - O PTHR23302
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X599
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.840

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