Sequence 1: | NP_001303362.1 | Gene: | Tmc / 26067066 | FlyBaseID: | FBgn0267796 | Length: | 2036 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012814975.1 | Gene: | tmc3 / 100494092 | XenbaseID: | XB-GENE-981378 | Length: | 1102 | Species: | Xenopus tropicalis |
Alignment Length: | 1735 | Identity: | 420/1735 - (24%) |
---|---|---|---|
Similarity: | 614/1735 - (35%) | Gaps: | 705/1735 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 194 SVRGYRGKRGSRSSRRASSPMDHVLDSVERRRSSVY-----TTSSE-----EGTNQESTQEQIFE 248
Fly 249 NIRLHKEVIQSVKLQPWPIRKKLKLVRQAKTYVARHEGALQERFAMSRSTRDLWARFKILMAARW 313
Fly 314 RHWKRETASFLTVLIPWELRIKEIESHFGSGVASYFTFLRWLMWVNIMIAIPLVAFVIGPEYFAT 378
Fly 379 KHGETDPRKRMSDPEARVAGNLFTFWEFEGYLKYSPMFYGYYSSTSGISTSGYKLPLAYFLTAVL 443
Fly 444 VYIYSFVATLRKMAENSRNSKLSSKDDECVFSWKLFTGWDFMIGHAETAHNRIASVVVGFKEALL 508
Fly 509 EEAEKKKDNRNWRVILQRILVNILVMGLLGLSGATVVL--LVNHSEDLAKHDNWLS---RNAVNV 568
Fly 569 TMTLLSFFLPMIFEALGLFENWHPRQQLRLQLARIMILNMLNLYSLMFSFIYKINSKEKPLQMLK 633
Fly 634 LENETNTMELKNLLSSIEALRAMTPTTSLYGESTSDGLFDDSTSTATWGEDGGGLFSTTAAAALI 698
Fly 699 STTVQRLKCYNMTVKCSKLRRNIISGKHLATTLMVLNLTTPAMVPPTLPTTLPTTFPTTLPTTLP 763
Fly 764 TTLPTALPTTLPTTLPTTLPSTLATTTATTSSIWSTTEETSPTTTTTSPWTTLPPSTTTTEATTT 828
Fly 829 TERATTTTEATSTTTLKITTAEINSTLSDTTKPLGKSIDTEIPNSTTNSATLSTIPATLNTTNLP 893
Fly 894 LNSTTKLTTTTSTEKPQGEDNFIYTTGEDEGSYDYGSDSTSDAPDNNSYSDITDYSSEPSEIEDF 958
Fly 959 DEQESTDQADDPLAKVLEQLDENETKGRRKRALAESPFFTSKYSRRHRNESAVSAGQPRETTESV 1023
Fly 1024 NATPSRWPFNWASFRQTTPRTTTTRRVPSGILTKEEWERLRRLRGRITTTTSTSTTSTTTRRPRW 1088
Fly 1089 RYRTTTTELTSTTEEESSTTESSTDSSSPGSTTNAFDSSSSTTEEDEYTTTEGSENRPYYVGYVD 1153
Fly 1154 ISEMGSTIYYDGDSEFLEECVITICPKGDDFFGSTTESPDSTTQSSDSKQLTTVKLTPLERKQKR 1218
Fly 1219 LKEVQLAIKQIQTNLTTMCWETSLGQELSKVIVFDGLMSIVAPLCIDFLRALFVRYVNQNWCWDM 1283
Fly 1284 EKTFPQYGDFKIAENILTLINNQGQVWMGIFFSPGLVLINLVKLMIMMYFRSWIVLTCNVPHEVV 1348
Fly 1349 FKASKSNNFYLSLLLTMLFLCVLPVGYAIVWLRPSWHCGPFSEYNRIAEFITNTTRNALPKQLHE 1413
Fly 1414 PLDYLTSSSTVIPLLLLLILIIYYLVSLTGALREANQDLRTQLQKEREEERKKIFKVPEVKQAEP 1478
Fly 1479 TATTLTNRWRKVLEASSPVTPTQPPDFDTEEYKNQARKELISRIMKKALRKGSATSDEDSFVRRD 1543
Fly 1544 DDDTDTEHQDSLPHDEEAKDKRFGLSRLQQIRRTRKPSLVDIVQIAKQERARAGSIVAGTSSSG- 1607
Fly 1608 ---------TGNFPIKETH----PKSRFKVEKHERKD----------RGSMKDKKDTRHRQSPQQ 1649
Fly 1650 QQQPPPYESPKDNEHDPDTNSRIVSASLLRRH-KEQAEGEEPPTTPD-----APQTPNSPVEPVE 1708
Fly 1709 QALEESTPETPTLAKSK--FHIVDEKKPPPHEVEDKPLPTPKESGSG------------GGSL-G 1758
Fly 1759 KFKFRKHKFKSNNVAAVKPEPEVFKFDERSVERSSDVPATHAAEYLNNEPSGTEEQDRSLPSPTP 1823
Fly 1824 SQGQGHHQRQLSVLSRQGRKKIGNLLALVREAVNLKKDDVEQAGS 1868 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tmc | NP_001303362.1 | TMC | 1242..1348 | CDD:285101 | 57/105 (54%) |
DUF612 | <1447..1844 | CDD:282585 | 92/441 (21%) | ||
tmc3 | XP_012814975.1 | TMC | 500..615 | CDD:369533 | 63/114 (55%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 149 | 1.000 | Domainoid score | I4409 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 550 | 1.000 | Inparanoid score | I1116 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000928 | |
OrthoInspector | 1 | 1.000 | - | - | otm48405 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X599 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.050 |