DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment WDY and Wdr64

DIOPT Version :9

Sequence 1:NP_001303588.1 Gene:WDY / 26067056 FlyBaseID:FBgn0267449 Length:1069 Species:Drosophila melanogaster
Sequence 2:XP_006250405.1 Gene:Wdr64 / 689524 RGDID:1591103 Length:1088 Species:Rattus norvegicus


Alignment Length:1233 Identity:252/1233 - (20%)
Similarity:445/1233 - (36%) Gaps:352/1233 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FNASV---NTK-SAVEYQTISSTQSHSAEEQSERLHKWISKD---QLEKLYSSF--LNTPERHVG 60
            ||.::   |.| |.|::..:  .:..:|:::.||...:|.|:   ..:|.|:|.  :..||    
  Rat     9 FNLALQINNFKASLVDFNKL--VEQTTAQKKEERAGLFIPKEDAIDYDKFYASVQQIFGPE---- 67

  Fly    61 IDELRIILEELDITFNDSMYTRLFLKINQNRDFKVDWNEFVSYLIFGF--QEEDP-SSQ--KESL 120
                   ::..|:..       .:.|:..|.|...||.|     |||:  .:||| :||  :|::
  Rat    68 -------VKNQDVKC-------FYRKLCNNPDAAFDWCE-----IFGYFSTDEDPLASQMDEENM 113

  Fly   121 ILPISGPP--MVRKSEHRSAICCL---------------ALLKAKSDQVPIDEVTETINFSFGGE 168
            :..:|...  ::..|..|..|.|:               .|:...:.|:.:...|...:.|    
  Rat   114 VFLVSRKQRIVISGSRRRDVIKCIVKVPQLDLLITASQKGLITVFNSQMRVQTNTSVTDTS---- 174

  Fly   169 DSPEASGMWVT------------ASHEGMMRFW--------TSHMEPIRTASSESICMSYAFFNN 213
                    |:|            |:.|..:..|        ..|...|:......:|:......:
  Rat   175 --------WITGCDYLGQLKRIVATTERTIIVWDYKAQGSSQEHYFVIKPMDHCLLCVCVVPLAD 231

  Fly   214 GKVHSKLILGDYAGNVRVLSYSPHLRGPFQAKPGAALIEVVWSDILRGKIPQFFPKEYINLHNEM 278
            ......::|||..|.|...:.:....|..|||....|    .:.:|..|   .|......|||:.
  Rat   232 QLCRDDILLGDDGGFVTRFTVNSDDFGLKQAKTKKKL----QTQVLDSK---NFKSIKRKLHNDW 289

  Fly   279 V-------------SCVYFSLHMNALFASAEYRNTKKYRGRCPGMIMVTYDERSNFRIPLGVSTF 330
            |             ||...|:|      |....:.|:.....|         ...|.:|.|.::|
  Rat   290 VMKIRFVPALNCFGSCSLDSVH------SLVLESLKRIEDNLP---------VREFAMPRGANSF 339

  Fly   331 FVAESHNIVVTGGPDTFVRIWDVYIPTEPSAILTGHNGGIVLVFVQPEENKVYSVDYQKIIKVWD 395
            ......|::||||.|..:|:|...|.|:|...|.||...|..:....:|..|.|:...|:.:|||
  Rat   340 CYCLKANVIVTGGDDKVLRLWHPNISTKPVGKLVGHMFSITEIVNNEKEQHVISLSSAKVFRVWD 404

  Fly   396 LHEHTLLQTYGDLVRLIHHSE---TDLTYY---YHSHLRELVVAGRKLISIKCCPRVRVDLTD-G 453
            :...::||.:       |.|:   .|:..|   |.:: ..:::.|..:|.:....|:..|... .
  Rat   405 IQTLSVLQVF-------HDSQGGPGDMQIYAMVYDTN-HGMLITGSSVIDMYPLTRMIQDTKQVP 461

  Fly   454 NTHAAPVSVVLYNRLFRNIVSCGLDSYIIVWDPWTGRRKIIMKSCHTKMIYGEIID-----IEIT 513
            :||...|:|:|||:.|..:::...:|.|.||:..||.:           || :|:|     ||:|
  Rat   462 HTHEREVNVMLYNKYFHQVLTICSESVIKVWELETGLQ-----------IY-QILDPHGFSIELT 514

  Fly   514 AACFDPLEQFLLTGARDGSLKIWNYNNAVVVRNMSIMP--------------------------- 551
            .|..|.......|||.:|::|:|::.:.   :.|.:||                           
  Rat   515 CATIDDSGFLFATGAYNGTVKLWDFGSG---QEMKMMPEGKDWVEEEHALLRLFFLKSQVKQQHF 576

  Fly   552 -----------------DQEVTAVIWVVDRIL-------------------AMGWDRQVTEFNDV 580
                             |..:..|||.:...:                   |||     ..|.||
  Rat   577 ILALERNGTIKMVQGKEDDIILTVIWELPNAMPYLQYGSHIVHLKMSTKERAMG-----IPFPDV 636

  Fly   581 ---VGREYGDPKKWPKFHTDDITCADVKLGEG---VVTATYSGEIIFWKL------ETGQPYRRY 633
               |.:...........:| |:.|.||...||   :|:.|.:|.||.|..      |..:|...:
  Rat   637 ELIVQKSISQQTTSSTTNT-DVNCIDVFQTEGFNLIVSGTLNGMIILWNFIAASVKEIYRPEDCF 700

  Fly   634 SV---MDPTRF--IELKLTAEEEKFIRQSKR--LASRLTHSGNHSLQTGRAGRSTVLNRPEDNRD 691
            |.   :||.||  .::.......:.:|:|.:  :.|......:...|:.:..:.::    .|...
  Rat   701 STDPELDPKRFRINDIMFLFRIPECVRRSSQDSICSSTQCDSSKGPQSSKGSKQSI----HDTEV 761

  Fly   692 YG--TDIPISVQAVLFLQTRPQTLKHGS-------VFISLDTGFIQVYSHHQRGGYIVEFLAVHK 747
            .|  ||.....|:|    ::.||....|       :..:.:.|.:::::  ..|..:.:.|...|
  Rat   762 KGEQTDTGSEQQSV----SKKQTASTSSAEPQPPLLVTAHEDGHLRLWT--LEGKLLKDMLPFTK 820

  Fly   748 -TGDCVLTMCTDRKNRYLYTGTAFGYIKVWYIVNFC-VPESEKTHVCMPKLRLEFIFLRKELFMT 810
             :...:.|:.||...|.|..|...|::.:..|.:|. .|..||..              |:|.  
  Rat   821 HSAISLTTLYTDSCCRILLAGNVEGHVILCNIGSFMDPPHDEKKF--------------KQLL-- 869

  Fly   811 RAKRAVRNQAEPLLVSSYKGHLKAINSIAFINLPKIIFTGSHDYSCRLW-TQGGRYLGTLG--TV 872
                            |::.|...|..:.::...:::.|.|.|.|.||| :..|.|.|..|  .:
  Rat   870 ----------------SWRAHSLEIVQVIYVEDKQLVLTASIDGSVRLWNSTSGHYCGYFGQRRM 918

  Fly   873 LPWSRLTPFERAGDDNHLYRMPPDIKKVASSTTLKVISGIQAETSIKISNGKTVEDREEETAQTE 937
            ...|:::.|....|.|   ..|.:||:.:..|..|.    :.|..:       :.|||    :.:
  Rat   919 FELSQISDFILPCDVN---EYPVEIKEESKFTEKKQ----KYEYPL-------IFDRE----RWK 965

  Fly   938 DVTELRKLLDKPVKEPIVGKHFELPGRSILDQHIELDTTQSYIA-------VFTQLKVHSTEMLE 995
            .::.:..|..:....|...:|.....:|:....|.....:.::.       ||..|.::      
  Rat   966 KMSSMSLLFKRSPPNPFEVQHDFKFFKSLSSPKIRRYALEGFMTENREAGIVFGSLPIY------ 1024

  Fly   996 RLPTPAVVSRVQTENYMDHYIPVEGKVDVSGS--AINIKQP-------SRRRSDKASDTRNVN 1049
            |:|:|..:          .::|:.|......|  .::.|:.       |||:|.|.:....:|
  Rat  1025 RVPSPTSL----------RFLPLIGSEAQRDSLEGVHSKKKSTHGHGGSRRKSLKRNFVPQIN 1077

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WDYNP_001303588.1 WD40 76..557 CDD:225201 126/591 (21%)
WD40 repeat 279..316 CDD:293791 8/49 (16%)
WD40 337..623 CDD:295369 88/366 (24%)
WD40 repeat 370..406 CDD:293791 10/35 (29%)
WD40 repeat 460..497 CDD:293791 12/36 (33%)
WD40 512..869 CDD:295369 87/450 (19%)
WD40 repeat 512..538 CDD:293791 9/25 (36%)
WD40 repeat 555..593 CDD:293791 10/59 (17%)
WD40 595..>859 CDD:225201 59/290 (20%)
WD40 repeat 600..622 CDD:293791 10/24 (42%)
Wdr64XP_006250405.1 WD40 132..538 CDD:225201 103/459 (22%)
WD40 repeat 177..216 CDD:293791 6/38 (16%)
WD40 repeat 221..257 CDD:293791 6/35 (17%)
WD40 284..538 CDD:295369 76/288 (26%)
WD40 repeat 291..335 CDD:293791 9/58 (16%)
WD40 repeat 340..373 CDD:293791 11/32 (34%)
WD40 repeat 380..415 CDD:293791 9/41 (22%)
WD40 repeat 426..460 CDD:293791 6/34 (18%)
WD40 464..928 CDD:225201 108/526 (21%)
WD40 464..903 CDD:295369 102/501 (20%)
WD40 repeat 468..505 CDD:293791 15/48 (31%)
WD40 repeat 512..537 CDD:293791 9/24 (38%)
WD40 repeat 561..591 CDD:293791 0/29 (0%)
WD40 repeat 827..872 CDD:293791 15/76 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352230
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D774295at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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