DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRY and Pkd1l2

DIOPT Version :10

Sequence 1:NP_001104126.3 Gene:PRY / 26067055 FlyBaseID:FBgn0267489 Length:1247 Species:Drosophila melanogaster
Sequence 2:XP_038954049.1 Gene:Pkd1l2 / 691069 RGDID:1588631 Length:2492 Species:Rattus norvegicus


Alignment Length:1310 Identity:253/1310 - (19%)
Similarity:444/1310 - (33%) Gaps:322/1310 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LHSLHQEWFTTKVSLNGLILVDY----------------FQTNSSERKEAFLWYRTSNLEKTLAF 88
            |..|...|.:.:|.|...:||:.                ...|.|:::|:  ..|:|.       
  Rat   482 LSGLRASWASDRVELGWDLLVNVSVAHGTLEELTFEVAGLNANFSQKEES--GGRSSG------- 537

  Fly    89 FGVSTDMQMPYDECYFHASEV-NFFSNGFFSV--IALITSDGL-YGNEVQAKTYTFVKTNLHITC 149
               |..:.:|.:..:.....| |.||:....:  :.:....|| ..:.::|:.....|.::.:..
  Rat   538 ---SYRVAVPAEGTFLVTVHVRNAFSDLSLDIGNVTVTAPSGLREPSGMKAEAENGHKWDMKVFT 599

  Fly   150 EPTFYIPRCHDSSRPLHYETSKVVVIRAVFTRHCPMDNF-IQYYWTL-------HDSTDTGKLHN 206
            ||..|:....|                  .|...|.|:. :.::|:.       ....:...|| 
  Rat   600 EPELYVDPFTD------------------VTLGWPDDDLSLDFHWSCGHCWAQWKTCVERQLLH- 645

  Fly   207 TAYSTGNRVIIPAYSQPNNQTLRVMLLIRSTF--DPLRTATT--------------KQSIVFSSS 255
                |..|                 ||:..||  .||.:|.|              .:..::.|:
  Rat   646 ----TDQR-----------------LLVLHTFCLPPLNSAVTLHLAILRGQELERETERCLYVSA 689

  Fly   256 RQLINVNIACVSNCNGNKYTIQMPIHLKGQCLRC----QNKKISKWIW--------RVEGLP--- 305
            ...:...|:|..||.        |:......|..    ....::.:.|        :.|.||   
  Rat   690 PLDLGPQISCQKNCR--------PVKADQDVLLTVTVGDETPVAMFNWYLDDTSPEKAEPLPAAC 746

  Fly   306 -VEGASKRLIFDVKETKKRLL-----------GIHLNVEAVNRYNSKLTYYGTSWVFLEKNMGPA 358
             :.|...|.:..:......||           .||:.|.|:..:     .||.....:.....|.
  Rat   747 RLRGFWPRSLTLLHSNSSVLLLNSSFLQTWGPVIHIRVTALTDH-----AYGEDTHVISMLPPPE 806

  Fly   359 DTMCTISPRVGNAHETQFLLHCNQSQARFKPLQYCIGVENFLVDECKSDEDI-QVRLPPTEH--- 419
            ...|.|.|..|:. .|.|.:.|:...|. .|::||..|::.....|..:..: .|.||..|.   
  Rat   807 VPACVIDPEEGSV-LTSFAIFCSTPTAP-GPVEYCFCVQSGSCLHCGPEPALPAVYLPRGEEKDG 869

  Fly   420 ----VVVMICDHFSVCDDVTVTVEVRRLEMDDSDNTVKEALSLARHWFEYADWQKAFLLLYQVAK 480
                ||:.:.|.....:...:.|:|...:....|.|.:|.:|.......|.:.....|||  :||
  Rat   870 FVLTVVISVTDQAGDREQTHMAVKVGHDDTGVEDVTFQETVSDRITTALYHEHGHEELLL--LAK 932

  Fly   481 LIKSKERLLNFIDTLYVYEPQTTVQLAHLVRLTKRVVL-SLEP----LDDMEVNVVARMLQLISS 540
            .:.|:   ||..|    ..|.:......:.|..:.:|| ||..    |::|:      .:|.::.
  Rat   933 AVSSE---LNKED----QGPGSGRLRMDIKRKVRELVLRSLSTVTTGLENMQ------RVQALAE 984

  Fly   541 TFRLIINSNELNTLMDIYYETMVNELCDILNKLNTE----WEYIPKSQCRAESESCLNIDNFRNR 601
            ..|.:.:.:|..||:..:      |....|.: |||    .:..||.|.|.|:.        |..
  Rat   985 ALREVTHHSEELTLVAQW------EASQALQR-NTEALLAAKVHPKDQRRQEAT--------RAM 1034

  Fly   602 LEQMSVLRPQGLEHIN------NWLHAHW---------KLSSCLFYMGMGTARRLHPEEGPKLIE 651
            .|.:..:....|.|.:      |...||.         :|.|.|.   :||.    |...|.::.
  Rat  1035 FEAVGSVLKASLSHGSDEPAEANSSQAHIVAQLLQVVDRLQSALL---LGTL----PGGLPAILA 1092

  Fly   652 RSTFSMRMESFDLDQDRNLEFQSADSMHTLIFTDKLLDELKRRLRTDEVLISIRSHKQSQYWWYP 716
            .|:.|:..   |..|.|:.:   ..|:||              ...|.|:..:    .:..:..|
  Rat  1093 TSSVSVYT---DRIQPRSWQ---GSSVHT--------------TAADSVIFIL----PATTFLCP 1133

  Fly   717 EQESHTQV-LVVNAYTINNIWKKSQ-EVAEPFQYISKLKINLSEGDPINEPTRQISKRGIDFDDP 779
            .::|...| :.:.:::.|....:|. ||:..   :..|::..|.|.||  |.:.:|         
  Rat  1134 TEDSQEPVDIRMMSFSQNPFPSRSHFEVSGT---VGGLRLTSSSGRPI--PVKNLS--------- 1184

  Fly   780 EEDIENVIHDCVYTSLEVRMYRTELYGHSVLGVTFTQADIDFCVLIRMTNIPKL----------N 834
             ::||.::   ...|..::.....|.....|.|..|..|....:.:.......|          |
  Rat  1185 -QNIEILL---PRISTRIKPNTLSLATGDALSVNVTAGDAALGIQLHWGPGVALTLSLGYGYHPN 1245

  Fly   835 EMERDSST---CLVRAGVLKQTTLLLRNRCEKSQPVYIYLRAANISEPWNNFFHSGAFFAFSTDI 896
            |...|:.|   .:..||.| .|.:|........:.:| |||... .:...:..........:|.:
  Rat  1246 ETSYDAQTRLPAVADAGDL-PTWILYPEDLPFGEGIY-YLRVVP-KDDLESTSDRNLTVGITTFL 1307

  Fly   897 RSCRIWNYARPEPSWQNFACM--PELNKSIHFGIHCRCNYISDFDADGMPIIAVPMNLKCHL--- 956
            ..|..|:.|  :.:|.|..|.  |....|   ..||.||:::.|   |...:.:|..:..|.   
  Rat  1308 AHCVFWDEA--QGTWDNSGCRVGPRTTTS---QTHCLCNHLTFF---GSTFLVMPNAIDVHQTAE 1364

  Fly   957 ------ERPIVGQSYQIIIFFFSLSSFVIIYIFYSMQSVSDWDKK---LYTELFPVGGKCYRGDL 1012
                  :.|:|..:...:...     :|::.|:...:.:.|..|.   :..:..|.....|   |
  Rat  1365 LFATFEDNPVVVTTVGCLCMV-----YVLVVIWARRKDIQDQAKAKVIVLEDNDPFAQYHY---L 1421

  Fly  1013 VLMCTFGGRYNAGTSANIIFAFKFFNQTRDIIVYQDPVFRTFKRNSTISLRLQNKHFCIPTG--- 1074
            |.:.| |.|..|.||:.:.......:...:.....|.....|:|.. :.:.|.:..|  |.|   
  Rat  1422 VTVYT-GHRRGAATSSKVTLTLYGSDGESEPHHLSDSDAAVFERGG-VDVFLLSTLF--PLGELQ 1482

  Fly  1075 -IAMRHDNSGVYPHFFCRNVVVCDLQTNEGQLFSIQQWIKCYTVYKTVTSFSLINTDDGKFHCGK 1138
             :.:.|||||..|.::...|:|.|...::...|....|:........:.....:.|:..:.....
  Rat  1483 SLRLWHDNSGDRPSWYVSRVLVYDPVVDQKWYFLCNSWLSIDVGDCVLDKVFPVATEQDRKQFSH 1547

  Fly  1139 LRFLHAMENFMGN--WY-LFQPIIGPWRFGTERLAFCKWER-SCIFIGKLFIAITFVVLFFGRTE 1199
            |.|......|...  || :|        ..:.|.:|.:.:| ||.| ..|...:...::|:|   
  Rat  1548 LFFTKTSTGFQDGHIWYSVF--------CNSTRSSFTRVQRVSCCF-SMLLCTMLTSIMFWG--- 1600

  Fly  1200 PMACDPSPKK 1209
             :..||:.:|
  Rat  1601 -VPKDPAEQK 1609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRYNP_001104126.3 REJ <217..476 CDD:366875 59/309 (19%)
PLAT 1019..1111 CDD:412108 22/95 (23%)
Pkd1l2XP_038954049.1 CLECT 70..186 CDD:153057
Gal_Rha_Lectin_PKD1L2 189..285 CDD:438688
REJ <697..894 CDD:366875 42/211 (20%)
GPS 1308..1347 CDD:460350 13/46 (28%)
PLAT_polycystin 1418..1537 CDD:238850 27/125 (22%)
Polycystin_dom 2013..2209 CDD:466668
PKD_channel 2211..2433 CDD:462341
Blue background indicates that the domain is not in the aligned region.

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