DRSC/TRiP Functional Genomics Resources

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Protein Alignment kl-3 and CG9068

DIOPT Version :9

Sequence 1:NP_001104482.3 Gene:kl-3 / 26067053 FlyBaseID:FBgn0267432 Length:4593 Species:Drosophila melanogaster
Sequence 2:NP_611111.1 Gene:CG9068 / 36817 FlyBaseID:FBgn0034106 Length:1227 Species:Drosophila melanogaster


Alignment Length:1448 Identity:255/1448 - (17%)
Similarity:507/1448 - (35%) Gaps:400/1448 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VSDQEREDQQRRRYQLLREMRQQRISSLGPNQRYVLEICADLLGIDPEEIVTGIVDESKYVEN-- 92
            ::|.:..|.:.|..    |.||:.|....|...|..|....|:|......|...:|...:.|.  
  Fly    12 LTDSDLTDDEERSV----EPRQEEIRPETPKPSYSDEELNQLVGYIQRMSVLSCLDHRDWQEGTL 72

  Fly    93 --VNG-IFEEKGPMAIMISN----ATMLGYPTDSGRYQEKLKYTEIQRSVCLRSDLVDLIGKWTV 150
              :.| :.|...|:..:..:    |..||.|                 |:|: |||        .
  Fly    73 DIIRGWLLEVHEPLLTIYYDRDALAACLGMP-----------------SMCV-SDL--------S 111

  Fly   151 VYRLNNEKSIDNRSVSDEVAIFMISAEERNSCLNVVKTFMDHVLKPSIEAVTEFGLAEKEQTQKF 215
            .:|....:........||:....::::. :.||   ...:|.:..|......|:....:   .:|
  Fly   112 YFRREPNEIFSVEGFHDEINFGTLTSDV-DGCL---MELLDRLYVPFFRNYLEWNATVR---NRF 169

  Fly   216 FHILNMYNTFLKSSEATVSSR----VNFDISHELFKGLLLVRWQIEASSKILTRVRLVERYFE-- 274
            ...::.:..||......:|..    |.|.|. ||..|                   .|:||..  
  Fly   170 CSSMDRFLAFLSGMHHQISGMSVMYVPFVIK-ELTAG-------------------PVDRYLVGS 214

  Fly   275 ------QWLRQIQGILVEGKQIQRDTPDVGPLQMLVN-----WRRMLARYTTITEFVTSRAFNNH 328
                  .|..||:.:|.:      ||..|....:.|.     |.   .||..:.......|.::.
  Fly   215 LEGIALYWTTQIRTLLAD------DTLTVPHDLVTVRDEFEFWE---YRYEVLQGINDQLAHSDV 270

  Fly   329 KDCLTLSRSSKLLNRWAEIDNQVTLA---LNEAKDNVRYISSLQKFWDPLYR----SSPNVIISS 386
            :..|.|..:::.:: ..::|..:..|   |:::..|::|:..|   .:|..:    :||..:...
  Fly   271 QKVLLLLHNAQSVH-MPQMDGLIERARKELHKSLSNIKYLHLL---IEPCSKIDAATSPADLTKL 331

  Fly   387 LPGLMVAIRNVSKTAHYFNTPVNVTGLMVKISNQLTITSKNYITDNEHSKVME------------ 439
            ||.::..||.:...:.|:||...:..|...:|||:.    .:.|  :.:||.|            
  Fly   332 LPRIIHLIRFIWLNSEYYNTTRLIAALFRNLSNQII----RFCT--KQTKVEEILSGKPRFGIRI 390

  Fly   440 ---------NYKNIYIHTV--DEMKNSNERPWTVSSVYILTCLQKFLQRLEKVKWIANTDITYSI 493
                     .|:.|| .|:  |..:...:.||.:....|...:..|::||..|..|..:.|.:..
  Fly   391 CNVAIECCLTYRGIY-DTISRDLAQKHTQMPWELDEGLIFNHIDAFVERLNDVIDICESMIVFGR 454

  Fly   494 LDR-----------------------IMISGMERFNAMIKGARMTISSQLYDPLNYRIETFDLDF 535
            ||.                       :.:..::..|      ::..:||.| .||.....:..|.
  Fly   455 LDENGSIPKPVFGGTCGEELEKIAESVEVQFLDTLN------KLQQNSQAY-ILNVHRADWYADV 512

  Fly   536 EKFVNEVEEAEVGMQQFVKLLSTECPSAASVMLVLKRFEALSLECL----CLDRRYL----EVAE 592
            ..|...:::.|..:|   :|:.......::|..:|:..:|:.....    .|.:.||    ::..
  Fly   513 AGFRKNMQKLEETVQ---RLIFNVFQQVSNVEEMLEALQAMLFYSYRQRGTLRKTYLKETSKLWR 574

  Fly   593 MLEREM-FLLKDVYNEERGNPFIPRNLPPVAG------RIIWIRSIFKKID-LPMQALKLRQCVL 649
            |..:|| ...:.:..|:....::.:::....|      |:.|:|...|..: ||  |:|.....|
  Fly   575 MFSKEMDATSRKLLEEQSRESWLSKHVSIALGYRINLERLTWLRDRLKNSEWLP--AVKESSPAL 637

  Fly   650 AHKKAQRTVRYYNYMNGIICHYEMAYHKAWFDYVEEVRC----------LLNAPIMTINKEEAIY 704
            |...|.|.            .::.....|:.|:|  .:|          |....::...|.:.:.
  Fly   638 AKFDALRH------------EFQKEIRLAYDDWV--AKCCGFSGDLCQRLDRYLVVRSKKFKGLL 688

  Fly   705 IVNIDRAILQLISETEWMWKLNLEVPNMAATITYCKDRLLGPATTLKLMLQRYDRLRTSLTPVFI 769
            ..|||.::|:|..:.:...::...:|                 :|:|.:.:|||.:|:    ::.
  Fly   689 ECNIDASVLELCEQAQHFERMGFAIP-----------------STMKKLYERYDTIRS----LYN 732

  Fly   770 NIMRFRLQEISIL---------------------LKPSLSTVTWISENLEDYVEKVCMKIKEVET 813
            .|::..|....||                     |.|.:..:|:.||..|::.|.....|.|   
  Fly   733 GIIKLALSHNRILAVLSDRERKLFRPLIQACDRQLAPGVFKITYGSEFNEEFFEDGTEFIAE--- 794

  Fly   814 FFNLILDIEDLRILQEMYSISDYLYIYVPEEPVSSYEFVEESNKLRSEIERILEKKSVCMERAVV 878
            |..|:|                               ..:.:|:   .:.||.||  :|      
  Fly   795 FQELVL-------------------------------IFKRANR---GVARICEK--IC------ 817

  Fly   879 DIINMFIDLLDFEQTDSKGRRVFQLPPEKLNDTNWRTEGFLPIDKWDFIQFHKIYRTIYLAPEDV 943
                 ...||.|..:.|....|||   ::|: :...:.|             .|.|:.|....::
  Fly   818 -----GTCLLHFAFSGSVDISVFQ---QQLS-SRLSSSG-------------DILRSYYSHVVEL 860

  Fly   944 LRTL--QFRNYEN-IRYELYHLRNDCMDLFSYYNSKIILALVAGSKRSLDFVRQNILRTNWRTNP 1005
            |...  ||::.:: :..|.....||..|:       :..:|:..::.||              |.
  Fly   861 LSAFSGQFQSVDDEMSAEWIAYVNDMDDM-------LASSLMTSARGSL--------------NK 904

  Fly  1006 MKPILHTD----------LEIDFYNGCYI-QPNLEIMQNDFNNAVLCCTEINYFVSTWGKQAKTQ 1059
            :...||.|          :|.|..:|..: .|:::.:.:..|..|.....:.......|.:.|..
  Fly   905 LYEALHCDADMASAPIIVVESDVKDGRIVFTPDMDAIGDMINGIVDSIRSMLDQFPRLGYKLKLP 969

  Fly  1060 ERRDRRVTVDENKYERSYFRYVMEHKDVIRAVQNLANGLLSYKSDMEEFQRDMFEKYKYLWAEDR 1124
            :::.|:...       |.||...|..:::|::|....           .||:...||:..|.::|
  Fly   970 KKQQRQGFA-------SVFREDQECSELMRSIQAEIG-----------IQREELAKYESEWNKNR 1016

  Fly  1125 ------EDIINSFVLTNPLTVDIRDMFL-HYDNISLKIETMSAKRIIGPIEVRMGSTIEKLVSES 1182
                  |:.....:::...|..:.:..: ||..::..:....|...:..|.:...:....::...
  Fly  1017 VLWQTTEEEFRQRLMSKSRTAGVFEGGIEHYSALADDVIFEDAITNVYFILINQNALKSTMLDWI 1081

  Fly  1183 KKW-----KVLLGH---LLSVQYKKQLDEMIEFITEQNNILDKPINDLDDVRQAMVVLEKVRDNY 1239
            :||     |:||.|   |:...|:...       ..:.|::..|....:.|....:..:.::|..
  Fly  1082 EKWQALNIKMLLDHGSNLMGAVYRYMR-------RNERNVMKVPRTIRETVAAKQLFEKLLKDVP 1139

  Fly  1240 IEMDVSLQLITDTYSLFSQFYIYVPQEDYDKVEGLQVL---FNKMLENAKKVSDRISEMEEPLLR 1301
            ::......:: :.:.|..::.:.:.:|.:::|.||:..   :.::||.|.::.|......:.||.
  Fly  1140 VKQSAFTPML-ELFVLLHKYQVKLSEETFEQVMGLETAWLHYLQVLEEADEMLDNEDSEAKLLLA 1203

  Fly  1302 ELNDG----IATFVQEFY 1315
            :..:.    :..|:::||
  Fly  1204 KHGEKFKLILKDFLEDFY 1221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kl-3NP_001104482.3 DHC_N1 266..800 CDD:285571 119/646 (18%)
DHC_N2 1378..1778 CDD:285579
P-loop_NTPase 1914..2145 CDD:304359
P-loop_NTPase 2229..2364 CDD:304359
P-loop_NTPase 2521..2790 CDD:304359
P-loop_NTPase 2889..3151 CDD:304359
MT 3164..3506 CDD:289543
AAA_9 3538..3754 CDD:289547
Dynein_heavy 3900..4582 CDD:281078
CG9068NP_611111.1 DHC_N1 211..784 CDD:285571 116/639 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450602
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100025
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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