DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo81F and Myo3b

DIOPT Version :10

Sequence 1:NP_001303492.1 Gene:Myo81F / 26067052 FlyBaseID:FBgn0267431 Length:2082 Species:Drosophila melanogaster
Sequence 2:NP_001380706.1 Gene:Myo3b / 366069 RGDID:1560313 Length:1333 Species:Rattus norvegicus


Alignment Length:878 Identity:268/878 - (30%)
Similarity:446/878 - (50%) Gaps:104/878 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DMTEMSEIDEIGINQNLNVRYNSDIIYTYTGSILLAVNPYKTINIFNKQTISEYHTCKLGDLSPH 76
            |:..:..:||..|...|..||...:||||.|.||:|:||::.::|::.|....||..|.....||
  Rat   363 DLVNLEVLDEDTIIYWLQKRYADALIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRSSNPPH 427

  Fly    77 VFAVAEAAYTSIVDDNINQACVISGESGAGKTESTKFILQYLCTITSNVSSWVQQQILEANTILE 141
            :||.|:.||..:|..:.:|..|||||||:||||:...|:|:|..:....:..::|:||:.|:::|
  Rat   428 IFASADNAYQCLVTFSKDQCIVISGESGSGKTENAHLIVQHLTFLGKANNQTLRQKILQVNSLVE 492

  Fly   142 AFGNAKTTRNDNSSRFGKFMQVCFDDNNCIKGCVILDYLLEQSRITFQSEGERNYHIMYQLVA-- 204
            |||||:|..|||||||||::::.|.....:.|..|.:||||:||:..|:.||:|:||.|.:.|  
  Rat   493 AFGNARTAINDNSSRFGKYLEMMFTPTGAVMGARISEYLLEKSRVIQQAAGEKNFHIFYYIYAGL 557

  Fly   205 QGQKNIGIANTFHLRPAEFYKYLNTSNSEKINMNLESK-----KFDAVTMAFTVLQIPQFVIDGV 264
            ..||.:.   .|.|...:..:|: .:.:|::..::.||     :||.:...|.::......:..|
  Rat   558 YHQKKLA---EFRLPEEKPPRYI-AAETERVTQDITSKESYRRQFDVIQHCFRIIGFTDKEVHSV 618

  Fly   265 FKVISSILWLGNIEFIDVDGE-VTDLTR-SDQEAISIISMLLGLSRCDFKKVLLIRQINVRGNIT 327
            :::::.||.:|||||..:..: .||.:. .:.||:...:.:|.::..:.::.|....:..||...
  Rat   619 YRILAGILNIGNIEFAAISSQHQTDKSEVPNPEALENAASVLCINSEELQEALTSHCVVTRGETI 683

  Fly   328 EIPLKIKEALENRHALAKALYSKMFTWLVSKINNCTNPGQ-----DDAKFLGVLDIFGFENFSHN 387
            .....:..|.:.|.|::||||.::|:|:|::||....|.:     :|...:|:|||||||:|..|
  Rat   684 VRANTVDRAEDVRDAMSKALYGRLFSWIVNRINTLLQPDKNICSAEDRMNVGILDIFGFEDFQRN 748

  Fly   388 SFEQLCINYTNEKLHKFFNHYVFALEQSIYEHEGIYFNHVEFTDNTPCLEILEKPPRCVFKLLTE 452
            ||||||||..||::..:||.:||||||..|:.||:....|::.||.|.|::..:.|..:..||.|
  Rat   749 SFEQLCINIANEQVQFYFNQHVFALEQMEYKKEGVDAVLVQYEDNRPLLDMFLQKPLGLLALLDE 813

  Fly   453 QCHMPQGSDLA----FLSNMHTEFESHPNYIKGSDRRHWETEFGIKHYAGLVIYAVGGFVEKNRD 513
            :...|||:|..    |..|:..:|...|..:        |..|||:||||.|:|...|.:|||||
  Rat   814 ESRFPQGTDQTLVDKFEDNLRCKFFWRPKGV--------ELSFGIQHYAGPVLYDASGVLEKNRD 870

  Fly   514 VQQDVMFEYMSYSKDVFIKDL------------STYQDIQFINSSYP----RGSSK--------- 553
            .....:...:..|::..::.|            .|...|...:.|.|    .|.:|         
  Rat   871 TLPADVVVVLRTSENKLLQQLFSIPLTKTGNLAQTRARITASSRSLPPHFSAGRAKVDTLEVIRH 935

  Fly   554 -------SKCTVSDNFRNQLQSLIDVLQNTKPWYVRCIKPNLQKRPNNYNSSLVLDQLKYLGVVD 611
                   .:.|::..||..|..|:..:...:|.:|||||||..::...::...||.||:..|:::
  Rat   936 PEETTNMKRQTMASYFRYSLMDLLSKMVVGQPHFVRCIKPNDDRKALQFSQDRVLAQLRSTGILE 1000

  Fly   612 IIRIRREGFPIHLSHKDFIVRYKCLIKNKSFEYPQKYLTN------ILEKNGMPTTEWQIGKSKI 670
            .:.|||:|:...:..::|:.||..|    :|...|....|      ||||:.:  ..|.:||:|:
  Rat  1001 TVSIRRQGYSHRILFEEFVRRYYYL----AFRAHQTPPANKESCVAILEKSRL--DHWVLGKTKV 1059

  Fly   671 FLRNAAYELLETNRKDTLYKNAVIIQ---KNW---KKYYIQKSFLRNKQAVLRIQHAYRGWRLRI 729
            ||:....|.|....::.:.: .|::|   |.|   ::|...|.  :.:::.:.||.|:||:..|.
  Rat  1060 FLKYYHIEQLNLLLREVMGR-VVMLQAYTKGWLGARRYKRAKE--KREKSAITIQSAWRGYDTRR 1121

  Fly   730 RFMRMRRSAIVIQSRLRGVFAREVAAALR---EMKRVDEELKKRDGIYEQLTSITTKTLADCERS 791
            :|.:.|..        |...|....|.|:   :.||..:...:.:..:|: ||......||.:..
  Rat  1122 KFKQTRHR--------RNESAAHTQAVLQTTPDEKRFPDSGVESNSRHEE-TSRNCPAEADTDWH 1177

  Fly   792 IQEELSVLAHISDNIRASAKPLSDKNDSDSNTA 824
            .|.:.|         .||:...|...|.::..|
  Rat  1178 PQTQSS---------PASSDVTSGHADKEAGNA 1201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo81FNP_001303492.1 Motor_domain 23..673 CDD:473979 230/705 (33%)
MyTH4 1091..1194 CDD:459939
FERM_F1_DdMyo7_like 1198..1299 CDD:340728
B41 1202..1419 CDD:214604
PH-like 1415..1523 CDD:473070
MyTH4 1664..1771 CDD:459939
FERM_F1_DdMyo7_like 1775..1880 CDD:340728
B41 1781..1992 CDD:214604
PH-like 1988..2076 CDD:473070
Myo3bNP_001380706.1 Protein Kinases, catalytic domain 20..310 CDD:473864
MYSc_Myo3 373..1062 CDD:276830 230/706 (33%)
IQ 1102..1124 CDD:197470 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.

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