DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-lambda and si:ch211-57n23.4

DIOPT Version :9

Sequence 1:NP_001334747.1 Gene:DIP-lambda / 26067049 FlyBaseID:FBgn0267428 Length:548 Species:Drosophila melanogaster
Sequence 2:XP_009292645.2 Gene:si:ch211-57n23.4 / 799595 ZFINID:ZDB-GENE-140106-153 Length:722 Species:Danio rerio


Alignment Length:568 Identity:121/568 - (21%)
Similarity:202/568 - (35%) Gaps:143/568 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 FLAKLSNTTVPIGRDISFTCVVDNLGHYRVAWIKSDSKAILGIHTHMVSLNPRLSVTHNGHNTWK 116
            ||.:.|:......|.:...|.|:..|...|.|.|:.:..:.||       ..|:.:..||    .
Zfish    25 FLIEPSDVIAVRDRPLMLDCRVEGEGPITVTWHKNGAPLLAGI-------GSRVKILSNG----T 78

  Fly   117 LHISRVQ------INDSGSYMC--QVNTDPMKSLSGYLDVVVPPDILNHPEHNPEDGVCQEGGSI 173
            |.|...|      ..|:|.|.|  |.:...:.|....:.:...|....|||....|    :||..
Zfish    79 LLIRSFQKRRDGDATDAGEYYCAAQNHYGMLVSRKARVQLASLPKFHTHPESMSVD----DGGVA 139

  Fly   174 SLMCSVTGVPRPKVLWRREAGKEIILRT-DGRDKTGFKSVEGERLVLTNVQRSDMGGYNCIASN- 236
            ...|.|.|:|...:.|.::   .::|.| |.|    :..:....|.:|.|:::|.|.|.|:||| 
Zfish   140 RFQCQVNGIPEASITWEKD---HVVLGTSDDR----YTLLPMGILQITGVKKADAGIYRCVASNI 197

  Fly   237 ---------------GIPPSVSKRFNVYVNFSPTVKAISQLVGAPVEREVTLECIVEVFPKPLNG 286
                           |:|.:..:         |.:.:..|.:...|.:...||||....|:|:..
Zfish   198 ANTRYSHEAHLNVTGGVPRTYKE---------PVILSGPQNLTITVHQTAILECIATGNPRPIVS 253

  Fly   287 WYRSEGNIKLHNGNKYNISEEVINIYTWHLNLTIRHLTKSDFGTYSCSSVNALG---KSESLIRL 348
            |.|.:|.         :|..|.|.:.... ||.|..::....|.|.|:: |..|   :..:|.||
Zfish   254 WSRLDGR---------SIGVEGIQVLGTG-NLMISDVSLQHSGVYVCAA-NRPGTRMRRTALGRL 307

  Fly   349 QELRLPPKLTT---------------------TPTPHMQTTGKSRRKHPASHKKGLNE-----VL 387
             .::.||:...                     .|.||:......:...|..:.|..|.     |.
Zfish   308 -VVQAPPEFIQWPQSVSKPAGGSAVFTCVAQGVPEPHIIWLKNGKILTPGDNVKLTNNNSTLAVT 371

  Fly   388 RF------------QETHFANQ--------IQQENEDHNEGFDLLKFTNSENSNIVLESGHINSM 432
            |.            :.|...||        :.:|..|..:|   ||.|....:::.|......:.
Zfish   372 RITSEDEAIYQCIAENTAGTNQASARLAVSLAKELPDSPQG---LKATALSKTSLQLSWTQPPAE 433

  Fly   433 INKEDVN-IYHPKQYGQEKTNKPSGTIPSTRTPWILTNAGSQRPALTSYATVALITSFWLFFWRV 496
            :....:. :.|.::||:.::.:....:..|.....|||.   .|| |:|       |.:|..:..
Zfish   434 VTDGIIGYVLHIRKYGESESKELQEAVSKTTFQHDLTNL---EPA-TTY-------SIYLKAYSP 487

  Fly   497 FHSLDWDAIRVSSVVHHVVVFKRRSYFEAPNY---ALRITVLQMLQEL 541
            ..:....:..||:.:..|.        ..|.:   |:..|.:|:|.||
Zfish   488 LGASQQSSTVVSTTLGGVP--------SPPTFFTKAINATAVQVLWEL 527



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.